Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g3786 ATGATCCCAAGTCATGGTGGTGGTGAAGAGAAGAAGGGTTCTTCAGATGTCGCCGGAAACGTGGTGGTGGTGGCGGTCAGAGCGTCGATGGAGATTTCAAGGACTGCTTTAGTGTGGGCTCTGACTCATGTTGTTCAACCCGGAGATTGCATTAAGCTTTTGGTCCTCATTCCAGCTCACTCCACAAGTAAAAGGATGTGGGGCCTTTCGAGATTTACCACTGATTGTACAACCAGTCAGTGGAGATCCCAAACTGCTTCAGATCAGAAGGAAATAATTGCCACTTCATGTTCGGAAATGATGCTTCAACTCCATGAATTTTATGATCCAGAAAAGATAAAGATCAGAATAAAGATTATTTCTGGTTCTTTATGTGGAGGAGTGGCCGCTGAAGCGAAGAGAGTTCAATCAAGCTGGGTTATATTGGACAAAAAATTGAAACATGAAAAAAAATACTGCATGGAGGAGCTGTGTTGCAATATTGTAATCATGAAGGGATCTCAGGCAAAGGTTCTTCGTTTGAATTTGATCAGTTCACCAAAGGTGGAACTAGAAGGGGGTTTTCCACTGTCACCAGAGCTGAATGAATATCCACGAAACTTGAAAGGAAAGTCTGAGCATCTAGATATGATCCGAGGTCCTGCTGTTACTCCTGCAAGTAGTCCAGAACATGGGTCACCATTGACTGCAACTGATATTGGAACATCATCAATATCAAGCTCAGATCCTGGGACGTCACCATTTTTCCTCTCTGACACGTATGGGAGACGAAGGAGAGAAACCTTTATTCATGATGAACTTAAAAATTTGGAGGAAAGTGAATCTGACTCTGAGAGTGAAAAGTTGAGCTTATCATCTAAAAGTTCATATTTTGAGCCATGGTTTGCAAACGTAATGAGCACTGATGGAGAATTTTCAAAACACAGTGGCAGGACACATCGATCCAGTGATAAGGCTTTGGTGTCTGCCTATGAAATCTTGCTTCAGAAAGTCTCCAACTTGGATCAAGTACCTGGTATAGGATTGTTTCGTTGTAAAATTGATGTAAACTTGAGCAAAAGTGTTAGGGAGGCAATATCGCTATCAAGGAATGCACCCCTTGGTCCTCCTCCATTGTGCTCTATTTGTCAGCACAAGGGGCCAGCATTTGGGAATCCTCCAAGGTGGTTTACGTATGCTGAGCTTCAACTTGCCACAGGGGGATTTTCACAAGCAAATTTCTTAGCTGAAGGTGGGTTTGGTTCTGTCCACCGTGGTGTCCTACCAGATGGACAGGTCATTGCTGTGAAGCAGTATAAATTGGCTAGTACTCAAGGTGATAAAGAATTTTGCTCAGAAGTTGACATCTTAAGCTGTGCACAGCACCGTAATGTTGTGATGCTGATTGGATTTTGTGTGGAGGAAGGAAGAAGATTGCTAGTTTATGAATATATCTGCAATGGGTCTTTAGATTCTCATCTTTTTGGGAGAAACAAGAATGTGCTGAGATGGTCTGAAAGGCAAAAGATTGCAGTAGGGGCTGCTCGTGGTTTGAGGTACCTTCATGAAGAATGTCGAGTGGGTTGCATCGTGCACAGAGATATGAGGCCTAACAATATCCTCCTAACTCATGATTTTGAAGCTCTGGTGGGAGATTTTGGACTTGCTAGATGGCAGCCAGATGGAAATATAGCTGTCGAAACTAGGGTGATCGGAACATTTGGGTATTTGGCCCCAGAATACGCTCAAAGTGGCCAAATCACTGAAAAAGCTGATGTGTATTCCTTTGGGGTAGTACTGCTGGAACTTGTCACAGGATGGAAAGCTATTGATATAAACCGGCCTAGAGGTCAGCAATGCCTCACTGAATGGGCACGGCCATTGCTAGAAAGAGATGCCATTCATGAACTGGTTGATCCAAGGTTGAAAAACTGCTATATGGATCAAGAGGTTCGTCGCATGATGTTATGTTGCTCCATGTGTCTACGGCAGGATCCTCATTTTAGGCCTAGAATGTCACAGGTGCTTCGGATGCTGGAAGATGATGTCATTCCTATGTGA 2040 0.4363 MIPSHGGGEEKKGSSDVAGNVVVVAVRASMEISRTALVWALTHVVQPGDCIKLLVLIPAHSTSKRMWGLSRFTTDCTTSQWRSQTASDQKEIIATSCSEMMLQLHEFYDPEKIKIRIKIISGSLCGGVAAEAKRVQSSWVILDKKLKHEKKYCMEELCCNIVIMKGSQAKVLRLNLISSPKVELEGGFPLSPELNEYPRNLKGKSEHLDMIRGPAVTPASSPEHGSPLTATDIGTSSISSSDPGTSPFFLSDTYGRRRRETFIHDELKNLEESESDSESEKLSLSSKSSYFEPWFANVMSTDGEFSKHSGRTHRSSDKALVSAYEILLQKVSNLDQVPGIGLFRCKIDVNLSKSVREAISLSRNAPLGPPPLCSICQHKGPAFGNPPRWFTYAELQLATGGFSQANFLAEGGFGSVHRGVLPDGQVIAVKQYKLASTQGDKEFCSEVDILSCAQHRNVVMLIGFCVEEGRRLLVYEYICNGSLDSHLFGRNKNVLRWSERQKIAVGAARGLRYLHEECRVGCIVHRDMRPNNILLTHDFEALVGDFGLARWQPDGNIAVETRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLLELVTGWKAIDINRPRGQQCLTEWARPLLERDAIHELVDPRLKNCYMDQEVRRMMLCCSMCLRQDPHFRPRMSQVLRMLEDDVIPM 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g3786 679 SUPERFAMILY Protein kinase-like (PK-like) 384 672 IPR011009 -
Alju01g3786 679 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 478 678 - -
Alju01g3786 679 Gene3D Transferase(Phosphotransferase) domain 1 478 677 - -
Alju01g3786 679 PANTHER OS01G0750732 PROTEIN 322 676 - -
Alju01g3786 679 ProSitePatterns Tyrosine protein kinases specific active-site signature. 523 535 IPR008266 GO:0004672|GO:0006468
Alju01g3786 679 Pfam Protein tyrosine and serine/threonine kinase 406 672 IPR001245 GO:0004672|GO:0006468
Alju01g3786 679 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 374 477 - -
Alju01g3786 679 CDD STKc_IRAK 408 673 - -
Alju01g3786 679 MobiDBLite consensus disorder prediction 222 248 - -
Alju01g3786 679 MobiDBLite consensus disorder prediction 213 251 - -
Alju01g3786 679 Gene3D Phosphorylase Kinase; domain 1 376 477 - -
Alju01g3786 679 ProSiteProfiles Protein kinase domain profile. 402 677 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g3786 Alju-ChrAlju01 67733709 67738227 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g3786 361 668 Trihelix Transcription Factor Family AT1G68690 50.641 1.09e-99 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Alju01g3786 PK_Tyr_Ser-Thr 1.7e-42 CL0016