Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g3776 ATGTCGTCTGATTCTGATGCCCCCTTCCCCAGTTCGTCATCTTCGACTCCGTTGCAACTGGACGATCCCCAAATGCGAAGATTGTCTCTGCTTCTCCCACTGCTGCTCAGTTTAGCACCTCCTCGCCAGACCCCCGAATTCGATACTGGTAGCCACCGTGATCGAATCCGGATCATCGTAGTTGACCCTTCAGCTGGAGCCATGATCGTGATCGAAGGCTCCGGAGATCTCCAATCCGTGCTTCAAGGCCTATCGGGGAAGCCCGGAGTGTTGCCGGCGTCAAAGGATTCGATTCAGGCCATGCCTAGAGTGGTGGTGACCGAAGAAGGCATGGATTGTTCGATCTGCTTGGAAACTTACGAAGTCGGGGGCGAAGCAAGGGAAATGCCTTGCAAGCATAAATTCCACTCTGGGTGTATTGAGAAGTGGTTAGGGCTTCACGGGTCTTGCCCAATCTGCCGATATGCCATGCCGAAGGAGGAGGAAAACACTACTATCGCCGTCAGCGAGGGCGAGCACGATGGCGGCGAGAGGAGGGAGAGCGGTGAGGGGTTGGTATCCGTGAGTGTATGGGTGAGGTCCCTGGACGAAGAAGATGATGATGATGGTGATGATCCAATGGAAGTGGATTCAGACTCGGATCGTGGATCCGGGGGAGCCAATAATGGTTCACGGGCAGGAAATTCTGCAGGGAATGAAGACTCGTGGATGATGGATCAAGAGGCACAGGACATGGAATTCTGA 744 0.5417 MSSDSDAPFPSSSSSTPLQLDDPQMRRLSLLLPLLLSLAPPRQTPEFDTGSHRDRIRIIVVDPSAGAMIVIEGSGDLQSVLQGLSGKPGVLPASKDSIQAMPRVVVTEEGMDCSICLETYEVGGEAREMPCKHKFHSGCIEKWLGLHGSCPICRYAMPKEEENTTIAVSEGEHDGGERRESGEGLVSVSVWVRSLDEEDDDDGDDPMEVDSDSDRGSGGANNGSRAGNSAGNEDSWMMDQEAQDMEF 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g3776 247 SUPERFAMILY RING/U-box 106 159 - -
Alju01g3776 247 MobiDBLite consensus disorder prediction 193 247 - -
Alju01g3776 247 Pfam Ring finger domain 112 154 IPR001841 -
Alju01g3776 247 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 54 158 - -
Alju01g3776 247 MobiDBLite consensus disorder prediction 1 22 - -
Alju01g3776 247 MobiDBLite consensus disorder prediction 195 209 - -
Alju01g3776 247 MobiDBLite consensus disorder prediction 215 236 - -
Alju01g3776 247 ProSiteProfiles Zinc finger RING-type profile. 113 154 IPR001841 -
Alju01g3776 247 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 87 160 IPR013083 -
Alju01g3776 247 SMART ring_2 113 153 IPR001841 -
Alju01g3776 247 FunFam E3 ubiquitin-protein ligase RNF181 82 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g3776 Alju-ChrAlju01 67609578 67610321 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g3776 1 193 C3H Transcription Factor Family AT1G26800 38.974 7.77e-37 127