Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g3769 ATGGAAAACTCTTTCCCTTCTGAGGCAATTCAACTCCCTCCCGGATTCAGATTCCACCCCACCGATGAAGAACTCATCACCCACTACCTCTCCCCCAAAGTCCTCGACCCCTCCTTCTCTCCTCTCGCCATCGCCGACGTTGATTTGAACAAGTCCGAGCCTTGGGATCTTCCCTGGAGGGCCAAAATGGGGGGGAGAGAGTGGTATTTCTTCTGCGTTAGAGACCGGAAATACCCCACCGGTTTGAGAACCAACAGGGCCACCGATGCCGGCTACTGGAAAGCCACCGGCAAGGACAAGGAGATCTTCAAAGCCAAGACTCTGATCGGCATGAAGAAAACTCTGGTTTTCTACAGAGGCAGAGCCCCCAAAGGTGGAAAAACCAACTGGGTCATGCATGAATATAGACTCCACCCTCAACATCATCATGATCTCCCCTCTAAGAATGAGTGGGTTCTGTGCAGAGTATTTCAGAAGAGTGGTGGAGGGAAGAAGATGACGGCCGAGACTGTGGCTTGTTCTGAATTGCCTCCATTAATGGAGGGCTCGCCAAATCAAACAGAGTTTGGGGAGTCATCTCACGTGACCTGCTTCTCCGACCCGAATCGTCATCAAGCGGAGGATCCGATGACCCGGGACGACATAGTGGATAGCCAAGTACAGGTCCCAAATAGCTTTCAGCTGGAAAACAATGGATGGGGAGATTTGGATGGAGATATATCCTCTGTGATATATAACAGCAGTGACATGATTCAGAGATCCTTTCAGAATCAACCATACTCGTCAGCTTCTGCTGGTCCCGTTGTCGACGACATTGGTTGCCTCTGGAATTACTCCACTTAG 843 0.5065 MENSFPSEAIQLPPGFRFHPTDEELITHYLSPKVLDPSFSPLAIADVDLNKSEPWDLPWRAKMGGREWYFFCVRDRKYPTGLRTNRATDAGYWKATGKDKEIFKAKTLIGMKKTLVFYRGRAPKGGKTNWVMHEYRLHPQHHHDLPSKNEWVLCRVFQKSGGGKKMTAETVACSELPPLMEGSPNQTEFGESSHVTCFSDPNRHQAEDPMTRDDIVDSQVQVPNSFQLENNGWGDLDGDISSVIYNSSDMIQRSFQNQPYSSASAGPVVDDIGCLWNYST 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g3769 280 FunFam NAC domain-containing protein 100-like 21 163 - -
Alju01g3769 280 Pfam No apical meristem (NAM) protein 13 137 IPR003441 GO:0003677|GO:0006355
Alju01g3769 280 SUPERFAMILY NAC domain 6 159 IPR036093 GO:0003677|GO:0006355
Alju01g3769 280 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 9 207 - -
Alju01g3769 280 Gene3D NAC domain 21 162 IPR036093 GO:0003677|GO:0006355
Alju01g3769 280 ProSiteProfiles NAC domain profile. 12 159 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g3769 Alju-ChrAlju01 67552518 67553547 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g3769 8 278 NAC Transcription Factor Family AT5G39610 53.357 6.29e-96 282
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Alju01g3769 NAM 8.2e-40 No_clan