Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g3767 ATGACCTTAATTTGCAGATGGTCGCTGATTGCTGCGAGGTTTCCTGGAAGAACATCGAATGACGTGAAAAATTACTGGAACAGCCACATACGAAAGAAGCTGCGGTGTTCTTTCACAGAAAATAATAAGGAGAAACAAGAGGCAAGAAGCAAGAAAAGGCACCAAGTATTAAGGCCCCAACCGACAACTTTGTCCAGAAACTACTCGTCAAGGACGAGAAAGGATTGGCCTGAAGAAGAAGCTGTTGTTGCAAATACGTATGATAATAGTAGTGGGAAAAGAGACAAGCCAATAATTGCGAATTCAGCAGAGAAGGCTAAAGAGTGGTGGCAAAGTTTGCTTGATGACGTCAATAAAGGGAATGGAGAAGACAACCTATGGTGCTTGGGCGAAGAGGAACACGGCAAGTTTCTGGCTCAATTATGGGACGACGACCATCAACTTGATTTCTTTCAGTGA 459 0.4357 MTLICRWSLIAARFPGRTSNDVKNYWNSHIRKKLRCSFTENNKEKQEARSKKRHQVLRPQPTTLSRNYSSRTRKDWPEEEAVVANTYDNSSGKRDKPIIANSAEKAKEWWQSLLDDVNKGNGEDNLWCLGEEEHGKFLAQLWDDDHQLDFFQ 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g3767 152 CDD SANT 6 30 IPR001005 -
Alju01g3767 152 SUPERFAMILY Homeodomain-like 5 35 IPR009057 -
Alju01g3767 152 Gene3D - 2 60 - -
Alju01g3767 152 Pfam Myb-like DNA-binding domain 6 29 IPR001005 -
Alju01g3767 152 ProSiteProfiles Myb-like domain profile. 6 30 IPR001005 -
Alju01g3767 152 MobiDBLite consensus disorder prediction 41 75 - -
Alju01g3767 152 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 34 IPR017930 -
Alju01g3767 152 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 5 90 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g3767 Alju-ChrAlju01 67501690 67502210 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g3767 6 115 MYB Transcription Factor Family AT1G66370 37.008 9.07e-16 70.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Alju01g3767 Myb_DNA-binding 5.4e-06 CL0123