Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g3762 ATGGCTTCTCACCTGTCGCATCGTTTTGTGTTCGATTTCGTGTCTGCATATCTATTATTGTTCGATTCCCCTCCACGACCCTCGCCAGTCGCCAATTTGAGAATGGATGGTTCAGCTGGCCGTGGCAGCAATGCTGATGTATATTTACCAAATTATAAGATGGGGAAAACACTTGGAATTGGATCCTTTGGCAAGGTGAAAATTGCAGAGCATGTATTGACTGGCCATAAAGTCGCCATTAAGATCCTTAATCGGCGCAAGATAAAGAACATGGAAATGGAAGAAAAAGTCAGAAGAGAAATCAAAATTTTAAGACTGTTCATGCACCCACACATTATACGACTTTATGAGGTCATAGAAACCCCAACGGACATATATGTTGTTATGGAGTATGTGAAATCCGGTGAACTCTTTGATTACATTGTGGAAAAGGGTAGGCTGCAAGAGGACGAAGCCCGTAATTTTTTCCAGCAGATAATCTCTGGTGTGGAATACTGTCACAGAAACATGGTGGCTCATAGAGACCTTAAGCCAGAGAATTTACTTTTGGACTCCAAATGCAATGTCAAAATTGCTGATTTTGGTTTGAGCAATATCATGCGTGATGGTCACTTTCTTAAGACAAGTTGTGGAAGCCCAAACTATGCTGCTCCTGAGGTTATATCTGGAAAATTGTATGCTGGGCCTGAAGTAGATGTCTGGAGCTGTGGTGTTATTTTATATGCTCTTCTCTGTGGTACCCTTCCTTTTGATGATGAAAACATTCCAAACCTTTTTAAGAAAATAAAGGGTGGGATTTATACTCTTCCTAGTCATCTATCACCTGGTGCTAGAGATTTGATACCAAGGATGCTTGTGGTTGATCCTATGAAGAGAATGACCATACCTGAGATTCGCCAACACCCATGGTTCCAATCTCACCTCCCTCGCTATTTAGCTGTGCCTCCACCAGATACAATGCAACAAGCAAAAAAGATTGATGAGGAACTCCTTCAGGAAGTGGTTAACATGGGCTTTGATAGGAATCAACTGGTTGAATCTCTCCAGAACCGGATACAAAATGAGGGTACTGTAGCATACTATTTGTTATTAGACAACCGATTCCGTGTTTCCAGTGGCTATCTTGGAGTTGAATTCCAAGAGACGATGGATTCTGGTTTCAACCGTATTCAACCTAGTGGAGTTACTGCTCCTACTGCCGGTCACCGCCTTCCAGGGTTTATGGATTATCCAGGAGCAGCATTAAGATCCCAGATCCCTGTTGAGAGAAAATGGGCCCTTGGGCTTCAGTCTCGTGCTCATCCTCGTGAAATAATGACTGAGGTCCTTAAAGCTCTGCAAGAATTAAATGTGTGTTGGAAAAAGATTGGACCTTACAACATGAAGTGCAGATGGGTTGCTGGCAATCCTGGTCATGACGGAATGGTAGATAATAATTTGTATGGTAGTCATTACTACAGAGATGATGCCACCATCATTGAGAACGACTCTGTTTCTAAGCCAAATGTGGTCAAGTTTGAACTTCAGCTTTACAAAACTAGGGAGGAGAAATATTTGCTTGATCTGCAAAGGGTCCTGGGCCCACAGTTTCTGTTTTTGGATCTTTGTGCTGCTTTCCTTGCACAGCTTCGTGTCCTCTAG 1641 0.4266 MASHLSHRFVFDFVSAYLLLFDSPPRPSPVANLRMDGSAGRGSNADVYLPNYKMGKTLGIGSFGKVKIAEHVLTGHKVAIKILNRRKIKNMEMEEKVRREIKILRLFMHPHIIRLYEVIETPTDIYVVMEYVKSGELFDYIVEKGRLQEDEARNFFQQIISGVEYCHRNMVAHRDLKPENLLLDSKCNVKIADFGLSNIMRDGHFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSPGARDLIPRMLVVDPMKRMTIPEIRQHPWFQSHLPRYLAVPPPDTMQQAKKIDEELLQEVVNMGFDRNQLVESLQNRIQNEGTVAYYLLLDNRFRVSSGYLGVEFQETMDSGFNRIQPSGVTAPTAGHRLPGFMDYPGAALRSQIPVERKWALGLQSRAHPREIMTEVLKALQELNVCWKKIGPYNMKCRWVAGNPGHDGMVDNNLYGSHYYRDDATIIENDSVSKPNVVKFELQLYKTREEKYLLDLQRVLGPQFLFLDLCAAFLAQLRVL 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g3762 546 SMART serkin_6 52 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g3762 546 SUPERFAMILY UBA-like 314 363 IPR009060 GO:0005515
Alju01g3762 546 PANTHER SERINE/THREONINE KINASE 51 369 - -
Alju01g3762 546 SUPERFAMILY KA1-like 361 545 IPR028375 -
Alju01g3762 546 Gene3D Transferase(Phosphotransferase) domain 1 43 381 - -
Alju01g3762 546 ProSitePatterns Serine/Threonine protein kinases active-site signature. 171 183 IPR008271 GO:0004672|GO:0006468
Alju01g3762 546 ProSiteProfiles Ubiquitin-associated domain (UBA) profile. 325 365 IPR015940 -
Alju01g3762 546 FunFam Non-specific serine/threonine protein kinase 428 544 - -
Alju01g3762 546 FunFam Non-specific serine/threonine protein kinase 41 131 - -
Alju01g3762 546 CDD UBA_SnRK1_plant 326 366 - -
Alju01g3762 546 CDD STKc_AMPK_alpha 49 304 - -
Alju01g3762 546 Pfam UBA/TS-N domain 326 362 IPR015940 -
Alju01g3762 546 FunFam Non-specific serine/threonine protein kinase 43 382 - -
Alju01g3762 546 SMART uba_6 327 364 IPR015940 -
Alju01g3762 546 Gene3D Kinase associated domain 1, KA1 428 544 - -
Alju01g3762 546 Pfam Protein kinase domain 52 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g3762 546 Pfam Kinase associated domain 1 503 545 IPR001772 -
Alju01g3762 546 CDD AMPKA_C 422 543 - -
Alju01g3762 546 ProSiteProfiles Protein kinase domain profile. 52 304 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g3762 546 SUPERFAMILY Protein kinase-like (PK-like) 49 324 IPR011009 -
Alju01g3762 546 ProSitePatterns Protein kinases ATP-binding region signature. 58 81 IPR017441 GO:0005524
Alju01g3762 546 ProSiteProfiles Kinase associated domain 1 (KA1) profile. 497 545 IPR001772 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g3762 Alju-ChrAlju01 67464587 67470301 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g3762 52 304 CBL-interacting serine-threonine protein kinases AT4G24400 52.362 5.82e-93 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_AMPK Alju01g3762 Pkinase 3.9e-80 CL0016