Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g3761 ATGTTTGACGAAGTTGAGATATTGCATATTTTTAGATGGTGGTGCAGAGAATTAAATAATTTGGCGAAGTTCTATAATAATCTTGGTGAATCCAGCCTTCGAGTTGATCTCGTCATTGTGGCATCACAAATTCAACTGAGGATTGAGGATGAGACGAATTACTCTTCAAATGAAATAATTGATATATGCTTGGTACCAGCCAATAATTTGCTTTGCAGATATAGTTTTCACGAACAGATGGCAAACACCGAACAAGCAAACTTTTCTGAGTTATTGTCTGAGCTAATAGGTTTGGCTGATGAAGTTGCTTCCGCTGCTCAGAACTGTGAAATTGAAAAGAATGCTTTCGCTGAGTTTGCCATATTAGTAGAGGAATTTGCATCAATCTTCAGTGATTTGAGAGACAAAAGCATGGTCATGGACAAGCCACCTATTAGAAAATCGTTGGAATCTCTTAAGAATGAGCTTAGGCGTGCTAAGGCTTTGACAAAAAGCCTTAATCAGAAACATCTTATTAAACAGATAGAGGACATAACTCGTGATCTTGGTCGATCACTGGGGCTGCTTCTTGTGTCCAGCCTTGAAGTGTCCACTGATTCTAGAGAAAAGATTAGTACATTGCAGAGAAAGTTGATGGGTGCAAGATTTGGTGGAAATGTAAGTTCAACTTCAAGTCCAAGATCAGAGTTTGTCAGTGATGTGAAGCTTGAAGGGGAAATAGAAGAAATAGTGGAATTCACTATTGAAGATGTTATATTGCAACTTAAACATGGTAATGATGAAGAATTCACAGTGGCACTTTTGAGACTAAAGGGGTTCATGAGAGATGAAAAAGCAGATTATGATTTAATTAATGAGGAAGTGCTTGTTGCCATTCTAATGAATCGACTAGGTTCAAGTAAGGCTGACAATAGACTGGCCATCCTTCAATTACTAAGAAGCATTGCTTTTGGCAGTGATGAAAAGAAGGAGAAGATGGCAGATATTGAGTTTTTATCAACTGTGGTGAAGTCTCTTTCGAGAGAAGCAGAAGAAAGGAGAGAAGCAGTGGGGCTTTTACTAGACCTCTCTAACCTCCCTTCAGTTAAGCGACGAATAGGAAGAATTCAAGGGTGCATTGTTATGCTGGTCTCTATTCTTAATGGAGATGATCCTGTTGCTTCACATGATTCAGTAAAGTTGTTGGATATATTGTCTAGTAATTCTCAAAATGCTCTTCATATGGCAGAGGCCGGTTACTTTAAGCCACTAGTGCAGTGTTTGAAGGAAGGGTCTGACATGACCAAGATCCTCATGGCAACAGCACTGTCGAGATTGGAGCTCACTGATCACAGCAAATTCACACTTGGAGAAGATGGGGTGATTGAACCTCTAGTCAACATGTTTACTTCTGGGAAGCTTGAGTCCAAGTTATCAGCTCTAAATGCGCTTCAAAATTTGTCCAGCTTGACAGAAAATGCACAACGTTTGATCAGATCAGGAATTGTGGTTTCTCTGCTACAACTTCTTTTCTCTGTGACATCTGTGCTCATGACTCTTCGGGAGCCTGTATCAGCTATTCTAGCTAGAATTGCTCAGTCAGAGCCCTTGCTTATTAATCCAGAGGCAGCTCAGCAGATGCTCTCACTTTTGAACCTTTCCAGCCCAATAATTCAGATTCATCTATTAGAAGCACTAGATAGCATTGCTGCTCATCCTGGTGCCTCAAAAGTGAGGAAAAAAATGAAGGAGAAAGGTGCACTTCAGCTTCTTTTACCTTTCCTGATGGAAACCAACACTAAAATCCAGAGCAAGGCCTTGCAATTTTTGTACACTCTTTCCAAAGATCTAACAGAAGAGTTGACAGAACATCTTGATGAAACCCATCTTTTCAATATTGTCAATATCATCTCATCATCAACATCTGAGAGTGAAAAGGCTGTTGCTGTTGGTTTACTGAGTAATCTTCCTGTTAGTGACAAGAAAGTGACAGATGCACTGAAGAGGGCAAATTTGCTCCCTATTTTAAAATCCATTATGTCATCAAGCACAGGAAGTAATTCACCCACAACAAGTTTCTTAATGCAGAATGTTGTGGGTGTCATAATCCGGTTCACAAATCCTTCTGACAAAAAACTACAACTTTTCTCAGCAGAACACGGGGTAATCCCTTTGCTAGTAAAACTTCTCTCAACAGGCTCACCAATCACAAAATCCAGGGCTGCAACCTCACTTGCTCAATTATCCCAGAATTCTGTGTCCCTTAGGAGGTCTAGAAAATCAAGATGGTTTTGTGTTCCTCCCTCAGCAGATGCCCATTGTGAAGTTCATGACAGTAATTGCATCGTGAAAAGCACATTTTGTTTGGTCAAAGCTGGCGCTGTCCCTCCGCTTATCCAAATATTAGAAGATAAAGAGGAGGAGGCTGTTGAAGTTGCTTTGATTGCCCTCTCAACTCTATTACAAGATGAAATATGGGAAGGTGGTGTGAACTGCATAGCTAAATCCTCAGGTGTTCAGGCTATTATAAAGATTTTAGAAGTGGGGGATGTAAAGATCCAAGAGAAAGCACTTTGGATGTTGGAGAGGATATTCAGAGTTCCAGAACACAGGGTTAATTTTGTAGAATCTGCTCAGGTTGTTCTCATTGATCTGGCTCAGAAGAGTGATTCTAGAATGCAGTCAGCAGTTGCAAAAGTATTAGCTGAGCTAGATCTCTTGCAAGATCAATCAAGTTACTTCTAG 2724 0.4023 MFDEVEILHIFRWWCRELNNLAKFYNNLGESSLRVDLVIVASQIQLRIEDETNYSSNEIIDICLVPANNLLCRYSFHEQMANTEQANFSELLSELIGLADEVASAAQNCEIEKNAFAEFAILVEEFASIFSDLRDKSMVMDKPPIRKSLESLKNELRRAKALTKSLNQKHLIKQIEDITRDLGRSLGLLLVSSLEVSTDSREKISTLQRKLMGARFGGNVSSTSSPRSEFVSDVKLEGEIEEIVEFTIEDVILQLKHGNDEEFTVALLRLKGFMRDEKADYDLINEEVLVAILMNRLGSSKADNRLAILQLLRSIAFGSDEKKEKMADIEFLSTVVKSLSREAEERREAVGLLLDLSNLPSVKRRIGRIQGCIVMLVSILNGDDPVASHDSVKLLDILSSNSQNALHMAEAGYFKPLVQCLKEGSDMTKILMATALSRLELTDHSKFTLGEDGVIEPLVNMFTSGKLESKLSALNALQNLSSLTENAQRLIRSGIVVSLLQLLFSVTSVLMTLREPVSAILARIAQSEPLLINPEAAQQMLSLLNLSSPIIQIHLLEALDSIAAHPGASKVRKKMKEKGALQLLLPFLMETNTKIQSKALQFLYTLSKDLTEELTEHLDETHLFNIVNIISSSTSESEKAVAVGLLSNLPVSDKKVTDALKRANLLPILKSIMSSSTGSNSPTTSFLMQNVVGVIIRFTNPSDKKLQLFSAEHGVIPLLVKLLSTGSPITKSRAATSLAQLSQNSVSLRRSRKSRWFCVPPSADAHCEVHDSNCIVKSTFCLVKAGAVPPLIQILEDKEEEAVEVALIALSTLLQDEIWEGGVNCIAKSSGVQAIIKILEVGDVKIQEKALWMLERIFRVPEHRVNFVESAQVVLIDLAQKSDSRMQSAVAKVLAELDLLQDQSSYF 907
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g3761 907 SUPERFAMILY ARM repeat 247 503 IPR016024 -
Alju01g3761 907 Gene3D - 394 754 IPR011989 -
Alju01g3761 907 Gene3D - 765 906 IPR011989 -
Alju01g3761 907 Coils Coil 149 169 - -
Alju01g3761 907 Gene3D - 88 181 IPR036537 GO:0007166
Alju01g3761 907 Gene3D - 264 393 IPR011989 -
Alju01g3761 907 SMART arm_5 483 526 IPR000225 GO:0005515
Alju01g3761 907 SMART arm_5 401 441 IPR000225 GO:0005515
Alju01g3761 907 SMART arm_5 442 482 IPR000225 GO:0005515
Alju01g3761 907 SMART arm_5 775 815 IPR000225 GO:0005515
Alju01g3761 907 SMART arm_5 703 743 IPR000225 GO:0005515
Alju01g3761 907 SMART arm_5 568 608 IPR000225 GO:0005515
Alju01g3761 907 SMART arm_5 819 859 IPR000225 GO:0005515
Alju01g3761 907 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 453 495 IPR000225 GO:0005515
Alju01g3761 907 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 251 907 - -
Alju01g3761 907 SUPERFAMILY ARM repeat 451 862 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g3761 Alju-ChrAlju01 67449529 67458957 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g3761 258 907 U-box Gene Family AT1G20780 29.446 7.01e-50 187