Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g3759 ATGGGTTGCATTAACTCTAAGAAGGCATTTGCCAGAGATTCACCTAAATATGTGCGTTCGGTATCGGCGGCAACCACCGATAAGAGGTCATCGGTTGCGGAGCCTCCTTCCAGGGTCCAATCTGGGGTTCTGACTTCTGAGACCAAAGCGGAACAACAACCATCGGAAGAACGGATACCGGATGGGAAGAAATTTAGGAAGAACAGTTCTAGAGGAACTGGTTCTTTAAGAATTTCGCATAGGTTAGTGGAAGCAGAACAGAATTCCGCCGGATGGCCTCCTTGGCTCACCTCTGTTGCAGGGGAAGCTATTCAAGGATGGGTGCCTAGCAAGGCAGATTCATTTGAGAAATTAGACAAGATTGGACAAGGAACATATAGCAGTGTGTTCCGGGCACGGGAGGTTGAAACTGGGAGGATGGTTGCCCTGAAGAAGGTACACATTGAGAATTTTCATCCTGAGAGCATTAGGTTCATGGCAAGAGAAATAGCAATCCTACGCAGGCTCAACCACCCAAACATCATGAAATTGGAAGGTATAATTACATCACGGCTCTCAAGTAGCATATACCTTGTTTTTGAGTACATGGAACATGACCTTGCTGGCCTAGTATCCTCTCCAGACATCAAGTTCAGTGAGACTCAGGTTAAATGTTACATGAGGCAATTGTTAAGTGGACTTGAACACTGCCACATTCATGGAGTTATGCACCGTGACATCAAAACATCCAATATATTGGTAAACAATGAGGGTGTTCTCAAGATAGGAGATTTTGGATTAGCAAATACCCTTGACAACAACAAGCATCTGCTAACCAGCTGTGTGGTGACTCTATGGTATCGTCCTCCTGAACTTCTGATGGGATCAACAAACTATGGTGTATCGGTGGATCTATGGAGTGTGGGCTGTGTATTTGCAGAACTTTTTCTGGGAAAGCCTCTTCTTAAGGGGAGGACTGAAGTTGAACAATTACACAAAATATTTAAACTTTGTGGATCTCCACCTGATGAATTTTGGAAAAAGTCTAAGCTTCCTCTTGCAACAATGTTTAAACCTAAGACTCATTATGAATGCTCACTAAGGGAGCAGTGTAAAGACTTTCCAGCTTGGGCTGTAAACTTAATTGAGACTTTACTTTCCCTTGACCCAAGTGGACGTGGGACTGCCTCCTCTGCCCTAATGTCTGAGTATTTCAGCACCAAGCCATATCCTTGTGATCCATCAATGCTGCCAAAGTATCCACCTCGCAAAGAAATGGATGTCAGGAATTGGGAAGAAGCACATAGGAGAAAAGCTGGAGGTAAAGTGCAAGAGACTGCAAAACCAAGTAAACAAAAGCGAGTCCATAAAGTTTTGCAAGAACCGACGGATGTCAATTATCCGGCTCCAAGAAAAGAGGAAATGCAGAACGTCTCTCAAAACGCTCGTAAAGATGATGGAAAAATGCATCTTCCTAAGGAAAAAGGAGGAGCTATGCATAGAGGGGCATCAAAGCCATCATCAAATGCAACGTCAGGGGCTACACGCGTATTAATGGATGCATCTCACGGCTTTAGTGTACCAATGCAAGTCCCAGGATCCAATGGCTTTACATGGACCAAAAACAGAAAAGGAGATGCTACATCTACTTTATCAGATGGCTCAAAAAGCAAAATTAGTGCACTTGATCCATCCTTTGCAAAAGGAACCTATGATTTAACCAAACGAGGCACAGATATATCAGAAAGAAAATATATTGGTAATGCAAGCCATCATAACAAAACTTCCAACAACCATCGACAACAAAAGCATCAGATTCCACACGGCGCACCAGACTCTCTTAATGAAGCTGATGAATACAATTATACAGATGTTGATCCAACAGAACAAACAGATATTGTGATAAATCCTCAGGTAACTGAAAAATCTCAGGCAATTATAATCATAAAGCAAGGTGACCTCCCTGAATTATCAGGACCCCAATTATCTCGACCAAATAGAATCATTGAGTCGTCACAGAGGAATGAAAATGGTATTTCTAGATCAACTCGCAAATCAAGACTAGGAAGAGGTAAAGAATCTGCTTGTTCTTTGTGTACTATTGCAGGGTAG 2091 0.4271 MGCINSKKAFARDSPKYVRSVSAATTDKRSSVAEPPSRVQSGVLTSETKAEQQPSEERIPDGKKFRKNSSRGTGSLRISHRLVEAEQNSAGWPPWLTSVAGEAIQGWVPSKADSFEKLDKIGQGTYSSVFRAREVETGRMVALKKVHIENFHPESIRFMAREIAILRRLNHPNIMKLEGIITSRLSSSIYLVFEYMEHDLAGLVSSPDIKFSETQVKCYMRQLLSGLEHCHIHGVMHRDIKTSNILVNNEGVLKIGDFGLANTLDNNKHLLTSCVVTLWYRPPELLMGSTNYGVSVDLWSVGCVFAELFLGKPLLKGRTEVEQLHKIFKLCGSPPDEFWKKSKLPLATMFKPKTHYECSLREQCKDFPAWAVNLIETLLSLDPSGRGTASSALMSEYFSTKPYPCDPSMLPKYPPRKEMDVRNWEEAHRRKAGGKVQETAKPSKQKRVHKVLQEPTDVNYPAPRKEEMQNVSQNARKDDGKMHLPKEKGGAMHRGASKPSSNATSGATRVLMDASHGFSVPMQVPGSNGFTWTKNRKGDATSTLSDGSKSKISALDPSFAKGTYDLTKRGTDISERKYIGNASHHNKTSNNHRQQKHQIPHGAPDSLNEADEYNYTDVDPTEQTDIVINPQVTEKSQAIIIIKQGDLPELSGPQLSRPNRIIESSQRNENGISRSTRKSRLGRGKESACSLCTIAG 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g3759 696 Gene3D Transferase(Phosphotransferase) domain 1 198 438 - -
Alju01g3759 696 MobiDBLite consensus disorder prediction 470 493 - -
Alju01g3759 696 FunFam probable serine/threonine-protein kinase At1g54610 102 197 - -
Alju01g3759 696 MobiDBLite consensus disorder prediction 429 505 - -
Alju01g3759 696 PANTHER CELL DIVISION PROTEIN KINASE 113 404 - -
Alju01g3759 696 MobiDBLite consensus disorder prediction 19 50 - -
Alju01g3759 696 ProSitePatterns Protein kinases ATP-binding region signature. 121 144 IPR017441 GO:0005524
Alju01g3759 696 MobiDBLite consensus disorder prediction 429 453 - -
Alju01g3759 696 FunFam probable serine/threonine-protein kinase At1g54610 198 438 - -
Alju01g3759 696 Pfam Protein kinase domain 115 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g3759 696 MobiDBLite consensus disorder prediction 529 552 - -
Alju01g3759 696 MobiDBLite consensus disorder prediction 1 77 - -
Alju01g3759 696 MobiDBLite consensus disorder prediction 582 611 - -
Alju01g3759 696 SMART serkin_6 115 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g3759 696 SUPERFAMILY Protein kinase-like (PK-like) 109 406 IPR011009 -
Alju01g3759 696 ProSitePatterns Serine/Threonine protein kinases active-site signature. 235 247 IPR008271 GO:0004672|GO:0006468
Alju01g3759 696 MobiDBLite consensus disorder prediction 51 68 - -
Alju01g3759 696 Gene3D Phosphorylase Kinase; domain 1 102 197 - -
Alju01g3759 696 CDD STKc_CDK9_like 115 398 - -
Alju01g3759 696 ProSiteProfiles Protein kinase domain profile. 115 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g3759 Alju-ChrAlju01 67436537 67440664 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g3759 107 538 Core Cell Cycle Gene Families AT5G10270 40.980 8.08e-105 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Alju01g3759 Pkinase 3.3e-70 CL0016