Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g3747 ATGGCGGCCGCAAAACCCCAGAGGACTCCTCAAGAAGTTGAGGATATAATTCTCAGGAAAATTTTTCTTATTTCCCTCACTGATGCCACGGGAAACGATCCTAGAGTCGTTTATATGGAATTGACAGCAGCTGTGATGCTCAGCGAAGGCAAGGAATTGAGGCTTTCACGGGACATGATGGAAGATATTCTGATGGATCGGCTATCTGGAAGTTGCTCTCCAGTGGAATCGCCTTTTCAGTACTTAATCGGTTGCTATCAACGAGCACACGATGAGGGTAAGAAAATTGCAAACATGAAAGATAAAAGTTTGAGGGGTGAGATGGAATCCGTGGTGAGAGAAGCAAAGAAGTTGTGTGTAATGTTTTGTAGAATGCATTTGGCGAATCCTGGCACGTTTCAAAGTGGAAATTCTAGTACGAGTAAACAGCAGAACTCGCCATTGTTGCAACTTATTCTCTCTGAGGTTGGTGGCACCATCAATGGCTTCGGTGGCAGTGGCAATGCCGGTGGAGTCAAAAGTCCGCCTGGATTTCTGGAGGAATTTTTCAGGGACTCACACTCGGATTTGGATCCAATATTGAAAGGCTTGTACGAGGAGTTGAGGGGTAGTGTGGTGAAAGTTTCGGCTCTTGGGAATTTCCAAGACTCTTTGAGGGCATTGCTGTTTCTGGTTGGATTTCCAATTGGTGCAAAGTCTCTTGTTAGCCACGCTTGGTGGATTCCTAAAGGAGTTTACATGCATGGACGTGCAATTGAAATGACAAGCATTATAGGCCCTTTCTTTCATATTAGCGCCCTTCCTGATCAAGGCTTTTTCAAGAGCCAGCCTGACGTTGGGCAGCAGTGCTTTTCAGATGCATCTACCCGCCGTCCATCTGATTTGCTATCTTCCTTCACCACGATTAAAACCGTCATGAATAACTTATATGATGGCCTGAGTGAGCTTCTCCTCATTCTTCTGAAAAGTACAGATACTCGTGAAAATGTACTAGAGTATCTTGCTGAGGTAATCAATAGAAACGCATCCAGGGCTCATATACAGGTTGATCCTATGACTTGTGCAAGTTCAGGCATGTTTGTAAATCTCAGTGCTGTTATGCTTCGTCTCTGTGAACCATTTTTGGATGCAAATTTAACAAAAAGGGATAAGATTGATGCAAAATATGTCTACTATTCAAACCGTCTGGATTTAAGGGGGTTGACTGCCCTTCATGCATCTTCTGAGGAAGTTGCTGAATGGATAAAGAGTAATGAGGGTGCGAAACATTTGCAACAATCTCTGGAAGAAAACAGTTCTGGTAGTAACAATGCTGGTGGCCCTTCAAATGCAAAGCCCGCATCACATGCTGAAAAGACAAAATACCCATTTATTTGTGAATGTTTCTTTATGACTGCAAGAGTGCTTAACTTAGGCCTCTTGAAAGCATTTTCTGACTTCAAACACTTAGTTCAGGATCTTTCTAGGTGTGAAGATTCTCTTTCAACACTCAAAGACATGCAGGCACAGTCATCCTCTCCTCAGTTGGAGTTAGATATAGCTCGACTTGAGAAAGAAATAGAGTTGTACTCTCAGGAAAAGCTTTGTTATGAAGCTCAGATATTGCGGGATAACACATTTATTCAAAACGCTCTTTCCTTCTACCGTTTGATGATTGTTTGGTTGGTTGGGGGATTTAAGATGCCTCTACCATCAACTTGTCCAATGGAATTTGCTTCAATGCCCGAGCATTTTGTAGAAGATGCAATGGAATTGCTCATATTTGCTTCTCGGATTCCAAAAGCCTTAGATGGTGTTGTGCTGGATGAATTCATGAACTTTATAATTATGTTCATGGCCAGTCCTGAATTTATCAAAAACCCATATTTGAGAGCAAAGATGGTTGAAGTCTTGAATTGCTGGATGCCCCGTAGAAGTGGCTCATCTGCTACAGCCACTCTATTTGAAGGGCACCAGCTGTCTCTTGAGTATCTTGTGAGGAATCTTTTGAAGCTCTACGTTGACATTGAGTTCACTGGTTCTCACACTCAGTTTTATGACAAGTTTAACATCCGCCATAATATTGCCGAACTGCTAGAATACCTATGGCAGGTCCCTAGTCATCGTAATGCCTGGAGACAGATTGCTAAAGAAGAGGAAAAGGGCGTCTATCTAAATTTCTTAAACTTCCTGATCAATGATAGTATTTATCTTTTAGATGAAAGTTTAAACAAAATTCTTGAGCTAAAAGAATTGGAAGCTGAGATGTCAAATACCACTGAATGGGAGCAACGACCAGCTCAAGAAAGGCAGGAGAGGACACGGCTATTCCACTCACAAGAAAATATTATTCGAATAGACATGAAGTTGGCAAATGAAGATGTTAGTATGCTTGCATTTACTTCAGAACAGATTACGGCTCCTTTCCTCCTTCCTGAGATGGTTGAAAGAGTAGCCAGCATGCTCAATTACTTTCTTCTGCAACTGGTGGGTCCCCAAAGAAAATCACTTACTCTGAAAGATCCTGAAAAGTATGAATTCCGACCCAAGCATTTACTTAAGCAGATTGTGCACATTTATGTTCATCTAGCCAGAGGTGATACCGACAGAATCTTCCCATCTGCCATCTCTAAGGATGGACGATCATACAATGACCAGCTGTTTAGTGCTGCAGCAGATGTCCTTCGGAGAATAGGTGAGGATGGAAGAGTTATACATGAATTTGTTGAACTCGGTGCTAAAGCTAAAGTGGCTGCTACGGAGGCCATGGATGCTGAAGCTGCTTTAGGGGAAATACCAGATGAATTCCTGGATCCAATTCAGTACACTCTGATGAAGGATCCAGTTATTTTACCTTCTTCAAGGATCACAGTTGATCGTCCTGTCATTCAGAGGCATCTTCTTAGTGATAGTACCGACCCATTCAATCGTTCTCATCTCACCGTCGATATGCTGATTCCCAATGATGAACTCAAGGCGAGAATTGAGGAGTTTGTGAGGTCCCAGGAATTGAAGAAACATGATCAAGGCCGAAGTGTTCAGAGCAGCAAGGCCACAATTCAGGCCACCAATGCGGAAATGTTGATTGATTAG 3072 0.4255 MAAAKPQRTPQEVEDIILRKIFLISLTDATGNDPRVVYMELTAAVMLSEGKELRLSRDMMEDILMDRLSGSCSPVESPFQYLIGCYQRAHDEGKKIANMKDKSLRGEMESVVREAKKLCVMFCRMHLANPGTFQSGNSSTSKQQNSPLLQLILSEVGGTINGFGGSGNAGGVKSPPGFLEEFFRDSHSDLDPILKGLYEELRGSVVKVSALGNFQDSLRALLFLVGFPIGAKSLVSHAWWIPKGVYMHGRAIEMTSIIGPFFHISALPDQGFFKSQPDVGQQCFSDASTRRPSDLLSSFTTIKTVMNNLYDGLSELLLILLKSTDTRENVLEYLAEVINRNASRAHIQVDPMTCASSGMFVNLSAVMLRLCEPFLDANLTKRDKIDAKYVYYSNRLDLRGLTALHASSEEVAEWIKSNEGAKHLQQSLEENSSGSNNAGGPSNAKPASHAEKTKYPFICECFFMTARVLNLGLLKAFSDFKHLVQDLSRCEDSLSTLKDMQAQSSSPQLELDIARLEKEIELYSQEKLCYEAQILRDNTFIQNALSFYRLMIVWLVGGFKMPLPSTCPMEFASMPEHFVEDAMELLIFASRIPKALDGVVLDEFMNFIIMFMASPEFIKNPYLRAKMVEVLNCWMPRRSGSSATATLFEGHQLSLEYLVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRQIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKELEAEMSNTTEWEQRPAQERQERTRLFHSQENIIRIDMKLANEDVSMLAFTSEQITAPFLLPEMVERVASMLNYFLLQLVGPQRKSLTLKDPEKYEFRPKHLLKQIVHIYVHLARGDTDRIFPSAISKDGRSYNDQLFSAAADVLRRIGEDGRVIHEFVELGAKAKVAATEAMDAEAALGEIPDEFLDPIQYTLMKDPVILPSSRITVDRPVIQRHLLSDSTDPFNRSHLTVDMLIPNDELKARIEEFVRSQELKKHDQGRSVQSSKATIQATNAEMLID 1023
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g3747 1023 ProSiteProfiles U-box domain profile. 924 998 IPR003613 GO:0004842|GO:0016567
Alju01g3747 1023 SUPERFAMILY RING/U-box 917 996 - -
Alju01g3747 1023 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 924 1004 IPR013083 -
Alju01g3747 1023 Coils Coil 506 533 - -
Alju01g3747 1023 CDD RING-Ubox_UBE4A 927 995 - -
Alju01g3747 1023 Pfam Ubiquitin elongating factor core 259 908 IPR019474 GO:0000151|GO:0006511|GO:0016567|GO:0034450
Alju01g3747 1023 MobiDBLite consensus disorder prediction 425 443 - -
Alju01g3747 1023 Pfam U-box domain 925 995 IPR003613 GO:0004842|GO:0016567
Alju01g3747 1023 FunFam Ubiquitin conjugation factor e4 a 924 1002 - -
Alju01g3747 1023 PANTHER UBIQUITINATION FACTOR E4 5 1000 IPR045132 GO:0000151|GO:0030433|GO:0034450
Alju01g3747 1023 MobiDBLite consensus disorder prediction 425 447 - -
Alju01g3747 1023 SMART Ubox_2 928 991 IPR003613 GO:0004842|GO:0016567
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g3747 1 1023 U-box Gene Family AT5G15400 73.905 0.0 1572