Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g3745 ATGCCAGCCTCCTTCTCTCTCCTCCGGTGGTTCGGTCGACAGCTCCTGGGAAGTAATTTTCAAAGCGGCGGCGACGCCGTAGACAACAACTTCATCGAGTGCTACGCTTGCACTCAGGTCGGCGTTCCGGTGTTCCACTCCACAAGCTGCGACGGCTATAACCAGCTCCAATGGGAGGCCTCCGCTGGCTCTTCCCTAATTCCCATCCAAAACCGAACAGCCTCCGGCAACCCGATGAGGAGGCCCAAATCAGGTCCGTTCGGGCGAGTTATCGACCCGAGAAGCAAGCGCGTGCAGTCGTGGAACAGAGCGTTGCTGTTATCGCGTGGGATGGCGCTGGCCATCGACCCGTTGTTCTTCTACGCGCTGTCCATTGGTAGGGAAGGGAGGCCGTGCCTGTACATGGATGAGCGGTTGGCGGCGATCGTGACGGTGCTTCGCACGTGCGTGGACGCGATGCACTTGTTCCACGTATGGCTGCAGCTGCGGATGGCTTACGTGTCCAAGGAGTCCCTGGTGGTTGGGTGCGGGAAGCTCGTGTGGGATGCACGTGCCATAGCGGCTCATTACCTGGGTTCCTTCAGGCGCTTCTGGTTCGATGCCTTCGTCATCTTCCCCATTCCGCAGGCCGTATTTTGGTTAGTACTGCCCAAATTAATAAGAGAAGAGCGAATTAAAGTCATAGTGACAATACTGCTATTAATGTTCTCGTTCCAGTTTCTGCCCAAGGTCTACCACAGCATCATCTTGATGACAAGAATGAAAAAGGTCACTGGCTACATCTTTGGCACCATTTGGTGGGGATTTGGCCTCAATCTCATTGCTTACTTAATTGCTTCTCATGTTACTGGAGGGTGCTGGTACGTCCTGGCAATTCAACGTGTTGTATCATGTCTCCAGAAGCAGTGTGAAAGTAGTCCTGGTTGTGATCTGATGTCTCTTTCATGCTCAGATGAGGCATGCTACCAGAATGTGGTGCGAAACAGCACAACACTCGAAAATCTATGTGGCGGAAACTCCACGGTAGTGGTGAGAAAGACTTCGTGCTTGGATCCTGCAGGACCTTTCAGTTATGGTATCTACCAGTCGGCTCTTCCAATCATATCCAGCAATTCTTTGGCTGTCAAGATTCTATACCCCATATTTTGGGGTTTGATGACTCTCAGCACATTTGGCAACGTTCTTGAACCCACAAGTCACTGGCTAGAAGTAATTTTCAGCATATGCATTGTACTTAGTGGATTACTGCTTTTCACTTTGTTGATTGGGAACATCCAGGTATTCCTACTTGCAGTAATGGCAAAGAAGAGAAAGATGCAGCTGAGGTGTCGCGACATGGAGTGGTGGATGAGGAGGAGGCAGCTGCCATCCCACTTAAGACGAAGAGTTCGCCATTTTGAGCGTCACAGATGGGCTGCCTTGGGGGGAGAGGACGAAATGGAATTGATAAAGGACTTGCCTGAAGGTCTGAGGAGGGACATCAAGCGCTATCTTTGCTTAGACCTCATCAAAAAGGTACCTCTGTTTCACAACTTGGATGATCTTATTCTTGATAACATCTGTGACAGGGTTAAACCCTTAATCTTCTCTAAAGATGAAAAGATAATCAGAGAAGGAGACCCAGTGAGAAGGATGCTGTTCATTGTTCGTGGACGAATAAACCGCATCCAAAGCCTAAGCAAAGGAGTGATAGCCACTAGTAACCTTGAAGCAGGAGGCTTTCTGGGTGATGAGCTGCTGTCATGGTGCCTTCGCCGGCCTTTTATAGATCGGCTTCCGGCGTCCTCAGCAACATTTATGTGTGTTGAATCAACAGAAGCCTTTGGCCTGAGTGATGAACACCTCAAGTACATTACTGACCACTTCCGCTACAAATTTGCTAATGAAAGACTCAAGAGAACAGCCAGGTATTACTCATCCAATTGGCGAACTTGGGCTGCTGTTAATATCCAACTTGCTTGGCTAAATTACAGGAAAAGGAGGAGTAGAGGTTCAGGGATTTCTGTAACTGATAATAGAGCCAATGAACGCAGGCTTCTGCAATATGCTGCTATGTTTATGTCAATAAGGCCACATGACCATCTTGAATAA 2091 0.4907 MPASFSLLRWFGRQLLGSNFQSGGDAVDNNFIECYACTQVGVPVFHSTSCDGYNQLQWEASAGSSLIPIQNRTASGNPMRRPKSGPFGRVIDPRSKRVQSWNRALLLSRGMALAIDPLFFYALSIGREGRPCLYMDERLAAIVTVLRTCVDAMHLFHVWLQLRMAYVSKESLVVGCGKLVWDARAIAAHYLGSFRRFWFDAFVIFPIPQAVFWLVLPKLIREERIKVIVTILLLMFSFQFLPKVYHSIILMTRMKKVTGYIFGTIWWGFGLNLIAYLIASHVTGGCWYVLAIQRVVSCLQKQCESSPGCDLMSLSCSDEACYQNVVRNSTTLENLCGGNSTVVVRKTSCLDPAGPFSYGIYQSALPIISSNSLAVKILYPIFWGLMTLSTFGNVLEPTSHWLEVIFSICIVLSGLLLFTLLIGNIQVFLLAVMAKKRKMQLRCRDMEWWMRRRQLPSHLRRRVRHFERHRWAALGGEDEMELIKDLPEGLRRDIKRYLCLDLIKKVPLFHNLDDLILDNICDRVKPLIFSKDEKIIREGDPVRRMLFIVRGRINRIQSLSKGVIATSNLEAGGFLGDELLSWCLRRPFIDRLPASSATFMCVESTEAFGLSDEHLKYITDHFRYKFANERLKRTARYYSSNWRTWAAVNIQLAWLNYRKRRSRGSGISVTDNRANERRLLQYAAMFMSIRPHDHLE 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g3745 696 SUPERFAMILY Voltage-gated potassium channels 92 429 - -
Alju01g3745 696 CDD CAP_ED 508 618 IPR000595 -
Alju01g3745 696 SUPERFAMILY cAMP-binding domain-like 435 622 IPR018490 -
Alju01g3745 696 ProSiteProfiles cAMP/cGMP binding motif profile. 508 587 IPR000595 -
Alju01g3745 696 Gene3D Jelly Rolls 506 624 IPR014710 -
Alju01g3745 696 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 83 665 - -
Alju01g3745 696 Gene3D Helix hairpin bin 434 499 - -
Alju01g3745 696 Pfam Ion transport protein 100 426 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g3745 Alju-ChrAlju01 67333172 67337712 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g3745 32 696 Ion Channels AT5G15410 74.704 0.0 975