Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g3693 ATGAACCTTAACAACAGCACCGTCGTCTTCATGTTCGGTATCTTCTTCCTAGTCCTATCCCTCTGCCTTGCCTGCCTCCGCCTCCGCCAGCTCGCCGGCAACCCCGCCATGTTCAATTTCCTCCCCCGTCCTTCCGCCACCGCCGCCGCCGCGGAGCTCCCAGCCGTAGCAGAACGTGGCCTCGATGACTCCACCATCAACACCTTCCCAAAGCTCTCCTACTCAGAGATGAAGAAAAGCTCTTATTATAATATTGAAGATCCTTCTAATTCTTCTTCTTGTTCCATCTGTTTAGCAGATTATAAGGAAGGTGACATGTTAAGGTTGCTTCCTGATTGTGGTCATCTTTTTCATCTTCGTTGCGTTGACCCTTGGCTCAAGTTACATAACACTTGCCCTATCTGTCGAACTCGAACTTCCTCTTCTTCTGTGAAAGCTCCTGACGACAACGACGATCGGTCAAACATCTCCGTCGTCAACGACGGGACATAG 492 0.5041 MNLNNSTVVFMFGIFFLVLSLCLACLRLRQLAGNPAMFNFLPRPSATAAAAELPAVAERGLDDSTINTFPKLSYSEMKKSSYYNIEDPSNSSSCSICLADYKEGDMLRLLPDCGHLFHLRCVDPWLKLHNTCPICRTRTSSSSVKAPDDNDDRSNISVVNDGT 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g3693 163 SUPERFAMILY RING/U-box 93 141 - -
Alju01g3693 163 MobiDBLite consensus disorder prediction 138 163 - -
Alju01g3693 163 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 8 144 IPR045899 -
Alju01g3693 163 ProSiteProfiles Zinc finger RING-type profile. 94 136 IPR001841 -
Alju01g3693 163 FunFam E3 ubiquitin-protein ligase ATL6 49 142 - -
Alju01g3693 163 Pfam Ring finger domain 93 136 IPR001841 -
Alju01g3693 163 SMART ring_2 94 135 IPR001841 -
Alju01g3693 163 CDD RING-H2_EL5-like 93 136 - -
Alju01g3693 163 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 49 141 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g3693 Alju-ChrAlju01 66482597 66483088 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g3693 60 147 C3H Transcription Factor Family AT5G06490 55.682 5.23e-29 103