Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g3692 ATGAGCTCCAACACATCGGAGCCACATGGCTCTAAGCCTTTGTTTAGCGGATATGCCTATTATTCCATCGGTCTAACCACCGGAATTCTCCTTATCTTCGCGTTCATCGCCGTAATCTTGTACCTATGCTCCCGTAGAATCGCCATGAACGCGTCACGGTTGTCTCAAGTTGGCAACGCAAGCTTTGACTTACGGACCATAACCATCGGAGCTCCTCCGGAGACGAACAGTCCAGTACAGTTAGGTGTGGATGATGAGACCTTGAGGACTTATCCGGTGCTTTTATATTCTGAAGTGAAGCGTGATCGAAAAGGCGGTACGGTTGGTGGTGGTGACTCCGCGGCTACTTGTTCAATATGCTTGGGGGATTTCAGTGAAAGTGAGTGGCTGAGGGAGTTGCCGGATTGCGGTCACTTGTTTCACCGGAAGTGTATAGATATGTGGCTGAGGATGAACTCTTCGTGTCCGTTGTGTCGGACCTCGCCGCTTCCGACGCCGGTTTCAACTCCGCTGGCTGAAGTTGCTCCCTTGGCAAGATCTGGGGCTTGA 549 0.5155 MSSNTSEPHGSKPLFSGYAYYSIGLTTGILLIFAFIAVILYLCSRRIAMNASRLSQVGNASFDLRTITIGAPPETNSPVQLGVDDETLRTYPVLLYSEVKRDRKGGTVGGGDSAATCSICLGDFSESEWLRELPDCGHLFHRKCIDMWLRMNSSCPLCRTSPLPTPVSTPLAEVAPLARSGA 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g3692 182 SMART ring_2 117 158 IPR001841 -
Alju01g3692 182 ProSiteProfiles Zinc finger RING-type profile. 117 159 IPR001841 -
Alju01g3692 182 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 99 163 IPR013083 -
Alju01g3692 182 SUPERFAMILY RING/U-box 116 164 - -
Alju01g3692 182 CDD RING-H2_EL5-like 117 159 - -
Alju01g3692 182 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 173 IPR045899 -
Alju01g3692 182 Pfam Ring finger domain 116 159 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g3692 Alju-ChrAlju01 66471825 66472373 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g3692 21 182 C3H Transcription Factor Family AT2G35910 45.062 7.40e-39 130