Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g3685 ATGGGCAAGAAACCACAAATCCTTCCTTCTCTCTTCAGAGCTCCTTCGAGAAAGCTTCAATGGCAGTTCTTTCCTCCATGTGCTTTCTCCCCCAAGACTCTCTCCTTTCGAGCTACCGCTGCGGCCGGCGAAGACATCTTCAGAACCGTCAACTCTGTCTACTTTGACCCCGTGGAGAAACCCGACCCTTGGTTCACGACGTCGTCGGAATCTGCGGCGAGCTTCACGACGGAGGACGACGTGGACAGAGACACGTGCACGGAGGAGTCGGTGGAGATGGTGGTTCGCGGCGTGAGGTCGTCGGAGAGGCTGTTCTTCGATCCGGACGACACGAGGTCGATCTTGGAGCAGGCGAAGGCGGGAATGGGGTTTCCGTTCAAGGAGAGCGAGGTTCTGGCGATGGAGTCGGAGGATCCGTACGGAGATTTCAGGAAATCGATGGAGGAGATGGTTGAATCGCACGGAGTTAGGGATTGGGAGGGATTGGAGGAACTATTGGGATGGTACCTGAAGGTGAACGGAAAGAACAATCACGCTTTCATCGTGGAGGCCTTCGTCGATTTACTCGTGAATTTGTCGAAGAAGAAGAATGCTGTTTCTCCTTCTTCAACCTCGAATTACTCTTCTGCCCTTTCTTCTTTCTCATCGTCTTCTTCACTGCGCGTATCTCATTCTCAGGAAGCTCTGAATGAGATTGTTGATGAGGTTGATGATCATCGATATTAG 726 0.522 MGKKPQILPSLFRAPSRKLQWQFFPPCAFSPKTLSFRATAAAGEDIFRTVNSVYFDPVEKPDPWFTTSSESAASFTTEDDVDRDTCTEESVEMVVRGVRSSERLFFDPDDTRSILEQAKAGMGFPFKESEVLAMESEDPYGDFRKSMEEMVESHGVRDWEGLEELLGWYLKVNGKNNHAFIVEAFVDLLVNLSKKKNAVSPSSTSNYSSALSSFSSSSSLRVSHSQEALNEIVDEVDDHRY 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g3685 241 ProSiteProfiles OVATE domain profile. 132 191 IPR006458 -
Alju01g3685 241 Pfam Transcriptional repressor, ovate 136 192 IPR006458 -
Alju01g3685 241 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 78 194 IPR038933 GO:0045892
Alju01g3685 241 NCBIfam uncharacterized plant-specific domain TIGR01568 133 193 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g3685 Alju-ChrAlju01 66339805 66340530 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Alju01g3685 Ovate 2.9e-26 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g1308 01 10290456 10291163 Alju01g3685 01 66339805 66340530 ECH
Alju03g2435 03 50986528 50987196 Alju01g3685 01 66339805 66340530 ECH
Alju01g3685 01 66339805 66340530 Alju01g3685 01 66339805 66340530 ECH