Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g3589 ATGAACTGTCTTCGGCTTCTTCCCTTATCCTCTGGTTTGCCTTTCCAAAGCTTTAGAAGCCACCATAGGAAGCCTCTTTGCTCTGCCAATTCATTAGGAATTTCCAATACTTGTGATCCAAATCGAAGTATAGCAGTGAAGTCAGCTTCTGGCTCCATGTCCAGTGCGGGGACAAACAGTGCTGATGTCAAGGAAGAGGAAAAATCTGAGACATATAGTCATAATATGACTGAAGCCATGGGTGCTGTTTTGACTTATAGGCACGAACTGGGGATGAACTACAACTTCATTCGTCCAGACTTAATTGTAGGATCATGCCTGCAGACTCTTGAAGATGTCGACAAGCTTCGTGTAATAGGAGTGAAAACTATATTTTGCTTGCAACAAGACCCAGATCTAGAATACTTTGGTGTTGATATCAAGGCCATTCAAGAATATGCTGGGTCTTGCAATGACATTCAACACTTGCGGGCTGAGATAAGGGACTTTGATGCATTTGACTTAAGGATGAGGCTTCCGACTGTAGTTAGTAAATTGTACAAGGCCATAAATCGCAATGGGGGTGTGACATATATACATTGCACTGCTGGACTTGGAAGAGCGCCAGCTGTTGCGTTGGCTTATATGTTTTGGGTTCAGGGTTATAAACTCGATGAGGCTTATAGATTGCTTCTGAGCAAAAGATCATGCTTCCCAAAGTTGGATGCAATAAAAAGTGCAACACCTGATATGCTTACAGGCTTCAGAAAAAAGCTTGTCACGTTGACGTGGGAAGACAACAATTGCTCTACAGTTGAAATTTCTGGACTTGATATTGGATGGGGCCAGAGAATACCCTTGCATCATGATGACAAACAGGCTCTGTGGGTTCTCGAGAGGGAATTACCTGTAGGACACTACGAGTACAAGTACATTGTTGATGGGGAATGGATTTGCAATCAGTATGAGCTTGTGACCTCTCCCAACAAAGATGGCCATGTCAATAATTATCTGCAAGTCATTGACGATGCAGACGGTGCTGATGCCTCCTTAAGGAAGAGGTTGATGGGTGATGATCCTGATCTCACAAAGGATGAACGGCTGAGAATAAGACAGTTTCTTGAAGCTCTTCCTGATGAAGAACCATGA 1128 0.4335 MNCLRLLPLSSGLPFQSFRSHHRKPLCSANSLGISNTCDPNRSIAVKSASGSMSSAGTNSADVKEEEKSETYSHNMTEAMGAVLTYRHELGMNYNFIRPDLIVGSCLQTLEDVDKLRVIGVKTIFCLQQDPDLEYFGVDIKAIQEYAGSCNDIQHLRAEIRDFDAFDLRMRLPTVVSKLYKAINRNGGVTYIHCTAGLGRAPAVALAYMFWVQGYKLDEAYRLLLSKRSCFPKLDAIKSATPDMLTGFRKKLVTLTWEDNNCSTVEISGLDIGWGQRIPLHHDDKQALWVLERELPVGHYEYKYIVDGEWICNQYELVTSPNKDGHVNNYLQVIDDADGADASLRKRLMGDDPDLTKDERLRIRQFLEALPDEEP 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g3589 375 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 170 228 IPR000387 GO:0016311|GO:0016791
Alju01g3589 375 Gene3D Immunoglobulins 248 338 IPR013783 -
Alju01g3589 375 MobiDBLite consensus disorder prediction 49 72 - -
Alju01g3589 375 Pfam Dual specificity phosphatase, catalytic domain 148 231 IPR000340 GO:0008138|GO:0016311
Alju01g3589 375 PANTHER DUAL SPECIFICITY PHOSPHATASE, SUBGROUP, CATALYTIC DOMAIN 30 373 - -
Alju01g3589 375 FunFam Phosphoglucan phosphatase DSP4, chloroplastic 86 269 - -
Alju01g3589 375 Pfam Glycogen recognition site of AMP-activated protein kinase 253 335 IPR032640 -
Alju01g3589 375 ProSiteProfiles Dual specificity protein phosphatase domain profile. 93 250 IPR020422 GO:0006470|GO:0008138
Alju01g3589 375 CDD E_set_AMPKbeta_like_N 253 333 - -
Alju01g3589 375 Gene3D Protein tyrosine phosphatase superfamily 86 366 IPR029021 -
Alju01g3589 375 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 90 235 IPR029021 -
Alju01g3589 375 CDD DSP_laforin-like 92 239 IPR045204 GO:0019203
Alju01g3589 375 SUPERFAMILY E set domains 251 333 IPR014756 -
Alju01g3589 375 FunFam Phosphoglucan phosphatase DSP4, chloroplastic 248 338 - -
Alju01g3589 375 SMART dsp_5 93 251 IPR020422 GO:0006470|GO:0008138
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g3589 Alju-ChrAlju01 65016619 65025258 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g3589 92 374 Protein tyrosine phosphatase (PTP) family AT3G52180 69.611 1.58e-149 422