Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g3574 ATGTCATCATCAGTAGAGGAAGTTGCTTGGTCTTCCACCATTGAAGAAGAACCAAGAAATCCTCTTGCTTCATTTGATGAAAGGAGTGGTTTTGATTCAAGAACTGGGATATATCACTCTCTTGCTAAGCTTAGTGCTAAGCATGAAATCCCCACAAGCTCTGATCTTGATGTTGCAAGACTTGTTCTTTCACACTTCCCTCATGCACACCAACTAGCTGCTAAAAAGCCTGCCTTTATTGATTCTTCAACTAACCAAACCATAAGCTACGGTGAACTTCGAAGCTCTATTCACTCCCTTGCTTCGGGTTTGTACCATGGAATTGGTATCCAAAAAGGCGATGTGGTGTTTGTTCTGTCACCAAATTCAATTTTGTACCCAACTATATGCCTTGCCGTGTTATCAATAGGAGCTATTCTTACCACAGCAAATCCTCTCAACACAGCATCAGAAATAGCCAAGCAAGTGAAAGATTCATGCGCTAAATTGGCCATTTCAGCACCAGAGGAAATGAAGAAACTTGTACCAACTGGGGTTCCTATAATTCTCACTACTCGTCAACCCGATGGCGAAATGGTTTCAGTTGAAGAGTTAATTGAAGGCTGCTCAGATAATTACCCAGAAGAGCTTCCTAAAGTTCATTTTTCTCAATCGGACACAGCAGCTATATTGTACTCTTCAGGCACAACTGGGATTAGTAAAGGTGTGGTTTTGACACATGTTAATATCATATCCATAATAAGTTTATTGACTTGGTCTGCAGATGTAACATCATCCCAAAATGATGTGTTTTTGGGGTTCATCCCAATATTTCACATTTATGGGTTGATGTTCTTTGGGTTGGGATTGTTGTGTAGGGGTATTACATCAGTTATAATGCAGAAATTTGACTTGAAAGAAATGCTTTTTGCAATTCAAAAGTATAAAGTCAATAACTTACCTGCAGTGCCTCCTGTGATTCTTGCTCTTGTGAAATATGGAACCAAATCTGGGGTAGACTTGTCAAGCCTTAGAAAAGTTGGTTCTGGTGCTGCACCTTTGAGTAAGAACTTAAGTGAAGAATTTAGAAACATGTTTCCTTGGGTTGAGCTTAGGCAAGGGTATGGATTAACAGAAAGTTGTGGGGCAGCAACATTTTGCGTGTTCGATAAAGATGCTAAAGCTCGCGCCGGCTCGTGTGGGAGGCTGCTTCCAACTTTCTGTGCAAAAGTTGTGGATGTTGAGACGGGGAAGAGTTTGCCTCCAAGGAAGGAAGGAGAGTTATGGCTTAAAAGTCCTACAATAATGAAAGAATATTTTGGGAATATGGAAGCAACATGTGTTACACTTGATTCAGAAGGGTGGATGAAAACAGGTGATCTTGCTTATGTTGATGAGGATGGATTTGTCTATGTGCTTGAAAGAATAAAAGAGCTGATCAAACATAATGGCTATCAGGTAGCTCCTGCAGAACTGGAAGCTCTGCTGATCAACCATCCCAATATTGTTGATGCAGCTGTTATACCGGTTGAAGATGTAGAAACTGGACAGATACCAATGGCGTATGTGGTGAAAGCAGCTGGCTCTGAGATCACAGAAGACCAAGTCATTCAATTTGTTGCCAGCCAGGTGGCTCCATATAAGAAAATAAGAAAGGTAAGGTTCATTGATGCAATTCCAAGGTCAGCTGCAGGTAAAATATTGCGCAAGGATCTTGTTTCACACAGCAAAGTTAAACTTGTTTCCAAGTTATGA 1734 0.4083 MSSSVEEVAWSSTIEEEPRNPLASFDERSGFDSRTGIYHSLAKLSAKHEIPTSSDLDVARLVLSHFPHAHQLAAKKPAFIDSSTNQTISYGELRSSIHSLASGLYHGIGIQKGDVVFVLSPNSILYPTICLAVLSIGAILTTANPLNTASEIAKQVKDSCAKLAISAPEEMKKLVPTGVPIILTTRQPDGEMVSVEELIEGCSDNYPEELPKVHFSQSDTAAILYSSGTTGISKGVVLTHVNIISIISLLTWSADVTSSQNDVFLGFIPIFHIYGLMFFGLGLLCRGITSVIMQKFDLKEMLFAIQKYKVNNLPAVPPVILALVKYGTKSGVDLSSLRKVGSGAAPLSKNLSEEFRNMFPWVELRQGYGLTESCGAATFCVFDKDAKARAGSCGRLLPTFCAKVVDVETGKSLPPRKEGELWLKSPTIMKEYFGNMEATCVTLDSEGWMKTGDLAYVDEDGFVYVLERIKELIKHNGYQVAPAELEALLINHPNIVDAAVIPVEDVETGQIPMAYVVKAAGSEITEDQVIQFVASQVAPYKKIRKVRFIDAIPRSAAGKILRKDLVSHSKVKLVSKL 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g3574 577 ProSitePatterns EF-hand calcium-binding domain. 81 93 IPR018247 -
Alju01g3574 577 ProSitePatterns Putative AMP-binding domain signature. 223 234 IPR020845 -
Alju01g3574 577 Pfam AMP-binding enzyme 74 474 IPR000873 -
Alju01g3574 577 Pfam AMP-binding enzyme C-terminal domain 484 559 IPR025110 -
Alju01g3574 577 FunFam Long-chain-fatty-acid--CoA ligase FadD 47 470 - -
Alju01g3574 577 Gene3D - 45 470 IPR042099 -
Alju01g3574 577 FunFam 4-coumarate--CoA ligase 2 471 572 - -
Alju01g3574 577 CDD 4CL 50 565 - -
Alju01g3574 577 Gene3D - 471 573 IPR045851 -
Alju01g3574 577 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 32 567 - -
Alju01g3574 577 SUPERFAMILY Acetyl-CoA synthetase-like 61 567 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g3574 Alju-ChrAlju01 64845254 64848093 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g3574 26 573 Monolignol Biosynthesis Gene Families AT1G20500 44.324 2.55e-157 459