Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g3571 ATGGGTACCCCTCTTTTGTTGCTTGACCCTCAATCAAAGACCCATCTTTTCCGTTTTGCTTCGGCAACTCCACCACCAAAAGCCCTAATCTCCACACCCACCTTCTTCTTCTTCTTCTTCAATCTAAACCCTCTTATGGGTCACGAGACTTTACCAGTTCCAGCTCCACCAGCCCCAGTAGTCACAGCACCGAATCCAACATCACCAACAGTAGTAGCACCACAAGCTCCTCCTACATCACTTGCTCCTGGCTTTCGCTTTCACCCAACTGATGAGGAGCTCGTTATTTACTACCTTAAGCGCAAAGTTTGTGGAAAAGCTTTCCGATTTGATGCAATCTCTGAGGTCGACATTTACAGAAGCGAACCTTGGGACCTCGCAGATAAGTCGAGGTTAAAGACAAGGGACCAAGAATGGTATTTTTTTAGTGCATTGGATAAGAAATACGGTAATGGAGGGAGAATGAACAGGGCTACGAGCAAAGGGTACTGGAAAGCCACTGGGAATGACCGTCCAGTGAGGCATGAACAGAGGACCGTAGGGCTGAAGAAAACTTTGGTATTTCATAGTGGAAGAGCTCCAGATGGTAAGCGTACCAACTGGGTAATGCATGAGTACAGGCTTGTTGATGAAGAACTGGAAAGAGCTGGAATTGGGTCGACCCAGGATGCATACGTTTTGTGTAGAGTATTTCACAAAAATAACATAGGACCTCCAAATGGTCAACGTTATGCACCTTTCATTGAGGAAGAATGGGATAATTCATCAGCACTGATCCCAGGGGCAGAGCCTGTAAATGAAGCTACAGCTGTCCGTCGCCCACTCATCGAAGGCAATGGCCATGTTGGCTGTTTTGAAAGAACTAATGCTGTCCAGGATACTCACTCCATCAATAAAGTTCCTCTTGATGTGAACAAGCTACCAATTGAAACTCAAAATCTTCTAGCTGTCTGTAAGAGGGAGAGCATGGCTGAGTTTCCGTCACCCGAAAGGGATAATTCCAAGTCTATGGATGACTACCCATCACCACAAACAGACAATCCGAAGCCGTTCTCGCTAATATACAAAAGAAGGCGACATAGCTTGAACTCTAGTCATTCAAATGTTCCAGAGCATTCGGTTCGTAACAGCCAGGATCCATGCTCATCAATAATAACCACTGCTGCAACAACACTCCCGACCACAACCACCACCACAACTGCCAGCACTTCGTCGAGAAAACATTTTCTGTCTGCACTGGTGGAGTTTTCCCTACTTGAATCTCTTGAACCCAAGGAAAGTCCTTCGACCCAGGTGCCAAAATTCGATCCCTCCTCTCTTGACTCGCCTCTGCCCCCAAGCTGCATGAAGTTCATCCAGCAGTTGCAGGACGAGGTCCACAAGCTCTCAGTGGAAAGGGAGACGATGAAGTTCGAGATGATGAGCGCACAGGCCATGATAAACATTCTGCAATCGCGCATCGACCTGCTGACTAAAGAGAACAAGGAGTTGAAGAGAGGCGCTGAGGATGATGCGTAG 1518 0.4717 MGTPLLLLDPQSKTHLFRFASATPPPKALISTPTFFFFFFNLNPLMGHETLPVPAPPAPVVTAPNPTSPTVVAPQAPPTSLAPGFRFHPTDEELVIYYLKRKVCGKAFRFDAISEVDIYRSEPWDLADKSRLKTRDQEWYFFSALDKKYGNGGRMNRATSKGYWKATGNDRPVRHEQRTVGLKKTLVFHSGRAPDGKRTNWVMHEYRLVDEELERAGIGSTQDAYVLCRVFHKNNIGPPNGQRYAPFIEEEWDNSSALIPGAEPVNEATAVRRPLIEGNGHVGCFERTNAVQDTHSINKVPLDVNKLPIETQNLLAVCKRESMAEFPSPERDNSKSMDDYPSPQTDNPKPFSLIYKRRRHSLNSSHSNVPEHSVRNSQDPCSSIITTAATTLPTTTTTTTASTSSRKHFLSALVEFSLLESLEPKESPSTQVPKFDPSSLDSPLPPSCMKFIQQLQDEVHKLSVERETMKFEMMSAQAMINILQSRIDLLTKENKELKRGAEDDA 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g3571 505 SUPERFAMILY NAC domain 75 234 IPR036093 GO:0003677|GO:0006355
Alju01g3571 505 ProSiteProfiles NAC domain profile. 81 233 IPR003441 GO:0003677|GO:0006355
Alju01g3571 505 Coils Coil 452 500 - -
Alju01g3571 505 Gene3D NAC domain 90 236 IPR036093 GO:0003677|GO:0006355
Alju01g3571 505 MobiDBLite consensus disorder prediction 322 351 - -
Alju01g3571 505 FunFam Nac domain-containing protein 86 90 236 - -
Alju01g3571 505 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 80 364 - -
Alju01g3571 505 MobiDBLite consensus disorder prediction 424 443 - -
Alju01g3571 505 Pfam No apical meristem (NAM) protein 83 208 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g3571 Alju-ChrAlju01 64815385 64822247 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g3571 46 499 NAC Transcription Factor Family AT3G10480 44.220 4.03e-119 358
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Alju01g3571 NAM 5.7e-36 No_clan