Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g3559 ATGGTGGTCTCTTCAGAACCACACAGCACCACCACCACATGTCTCCGATCCACAAGGTCCTTCGCCGTCCAGCTCATCACCGGGCGGTGGTTCATGATATTCTCCTCCTTCCTCATCATGTCGGTCTCCGGCGCCAGCTACATGTTCGCTCTTTACTCTCGTGACATGAAGTCTGTCCTCGGCTACGACCAATCCACCCTTAACCTCCTCGCCTTCTTCAAAGACCTCGGCTCCAGCATCGGCATCCTCTCCGGCCTCCTCAACGAGGTCACGCCGCCGTTCGTCGTCGTCACCATCGGCGCCGTCCTCAACTTCTTCGGCTACTTCATGATCTGGCTCGCCGTCAACCATAAATTCCCCCACCCTCCCTCTGTCGCCCTCATGGCCTTCTACGTCTTCGTCGGCGCCAACTCCCACTGCTCCACCAACACCGGCGTCGTCGTCACCTCCGTCAAAAACTTCCCCGGCTCCCGCGGCATCGTCATGGCAATGCTCAGCGGCTACCTCGGCCTCAGCGCCGCAATCATCACTCAATTATATTACGCTTTCTATGGAAACGACTCAAAGTCTCTTCTTTTGCTTATGGCTTGGCTTCCCACAGCAACTTCCTTTTTGTTTCTTCCAGTCATAAGACACCATAAGGGCTTTCAACAACCAAATGACACCAGAAACTTCTACAAGTTCGTCTATTTGTCTCTTCTTCTCGCAGGTTTTCTTCTCATCATCATCATCCTCGAAAAATGTCTCAAATTCACCCAGAACGAGTATTATCTCTCCTCTTCTTTCATGCTTCTCCTTCTAATCCTTCCCGTCGTAGTCGTAATCTCAGAGGAGCTTAACCTTTGGAGAGCCAAGAAACAACAAGAACCACGGAAAGTAGTAGTAACCATAGCCACAGAAAAACCCAAACTTGATGAGTACGAGAATACGACGAAACACAGAGAAGAAGCTTCTTCTTCTTCTGGGTCATGTTCATGGTGGAGGGACATATTCAGAAAGCCAGAAAGAGGCGACGACTATACGATTCTGCAAGCGATTCTAAGTCTCGACATGGCGATTTTGTTTTCTGCAACAATTTGTGGTCTTGGAGGAACAATAACGGTAGTGAACAACCTGAGCCAAATAGGTACGGCTTTAGGTTACTCACCTCATAGCATAACAACTTTCGTGTCACTAATGGCGATCTGGAAATATCTGGGGAAGATAGCTCTGGGTGTGGGATCAGAGTTCATGGTAACAAAGCTAAAATTTCCTAGACCCTTCATGTTAAGTTTAATTCTGCTCCTTTCATGTGTGGGCCATCTTCTTGTAGCCTTCAACGTCCCAAATGGACTGTATGTGGCATCAATAATTATAGGGTTTTGCTTTGGAGCCAGCTGGCCAATACTTTTCACCATTATTTCGGAGCTTTTTGGGCTCAAATATTACTCGACGCTTTATAATGTCGGGTCGATCGCGAGCCCGATCGGGTCGTATTTGATGAGTGTGAGGGTGGCTGGTTATTTGTATGATAAGGAAGCTATGAGGCAATTGGCTGAGAAGGGTTTGAAGAGGAAGGAAGGAGAAGAATTGAACTGTAATGGGAATGAGTGTTATAGATTGGCCTTCTTTATTATTACGGGTGTGACCTTGTTTGGGGCACTTGTGTCCTTAATTTTGGTGGCTAGGACCAGAAGCTTTTACAGAAGTGATATTTACGAGAAGTTTAGAGAGAAGGAAGAAGTTATTAATAATCATAATAACGAGACGGAAATGGGTGTTGTGGTGGCTCACAAACAAAATGGACCGCCAAGTGCAAATTGA 1803 0.472 MVVSSEPHSTTTTCLRSTRSFAVQLITGRWFMIFSSFLIMSVSGASYMFALYSRDMKSVLGYDQSTLNLLAFFKDLGSSIGILSGLLNEVTPPFVVVTIGAVLNFFGYFMIWLAVNHKFPHPPSVALMAFYVFVGANSHCSTNTGVVVTSVKNFPGSRGIVMAMLSGYLGLSAAIITQLYYAFYGNDSKSLLLLMAWLPTATSFLFLPVIRHHKGFQQPNDTRNFYKFVYLSLLLAGFLLIIIILEKCLKFTQNEYYLSSSFMLLLLILPVVVVISEELNLWRAKKQQEPRKVVVTIATEKPKLDEYENTTKHREEASSSSGSCSWWRDIFRKPERGDDYTILQAILSLDMAILFSATICGLGGTITVVNNLSQIGTALGYSPHSITTFVSLMAIWKYLGKIALGVGSEFMVTKLKFPRPFMLSLILLLSCVGHLLVAFNVPNGLYVASIIIGFCFGASWPILFTIISELFGLKYYSTLYNVGSIASPIGSYLMSVRVAGYLYDKEAMRQLAEKGLKRKEGEELNCNGNECYRLAFFIITGVTLFGALVSLILVARTRSFYRSDIYEKFREKEEVINNHNNETEMGVVVAHKQNGPPSAN 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g3559 600 SUPERFAMILY MFS general substrate transporter 257 560 IPR036259 -
Alju01g3559 600 Gene3D MFS general substrate transporter like domains 219 574 IPR036259 -
Alju01g3559 600 CDD MFS_Mch1p_like 28 547 - -
Alju01g3559 600 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 30 564 - -
Alju01g3559 600 SUPERFAMILY MFS general substrate transporter 17 216 IPR036259 -
Alju01g3559 600 Pfam Major Facilitator Superfamily 354 556 IPR011701 GO:0022857|GO:0055085
Alju01g3559 600 Pfam Nodulin-like 29 275 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g3559 Alju-ChrAlju01 64546114 64547916 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g3559 17 572 Nodulin-like Gene Family AT2G39210 58.645 0.0 684
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g3559 01 64546114 64547916 Alju03g2579 03 52170488 52172284 CCT
Alju01g3559 01 64546114 64547916 Alju01g3559 01 64546114 64547916 ECH
Alju01g3559 01 64546114 64547916 Alju01g3558 01 64513504 64515441 ECH