Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g3541 ATGAATACAAAAGGCAGTTCAACTACTAGAGAAGTTGACTCTGGAAATTTAACTGATGTGAAAGGGTGTCAACAAGCAATTGTTTATCTTCTCCTTTCAGAGTCAGTGGCCAAGGGACATGTGATGGTTGCTAAATCTCTTCGTCAGTATTTAAGAGTTGGTCTGCATTCATGGGTCTATTTGAAGGCATGTGATGTTAATTTGGAAAAAGCTATTCCCTCCTTCTCGCTTTCTCCTTGCCGCTTCAGAATGTTAAGGCAGGATAATGATGGTGATAATAATATAGATAAGAACAAGCTCACAAGGACTGCAGCAGGCGTGTTTGGGGATTTTGCGGATTGGTCTATCCATAATGGAGTTATTAATGTTTTTTCAGATGAATCCCATTCTGAAGCAGATGAAGAGGTTGCAAATCAATCTGTGAATCAAAACGGGCTACAGCATCTTCTAAGAGTATGGTATATTGCACAACTTGATGCAGTTGCTTCCTTTATTGGTATGGACGTTAATGCACTGGTATTGGGTTCTAAAACCTTACTTCATTTTGAAGTGAGTTACATAAAGCTTGGAACTAACGGAAAGGTTCAGTTAGCTTCTAATTCATTAGAAAACAGAAGCAAGACAGCTGAAATATTGTTTTTATTGACTATTGGAGAAGATTCTTTGCATCATGAAAAAATTACTGCATATGAAATTGCACTTGGTGAAAGAAACAAAATGAACAGTAATCCAGCAGATCAACAGCTGTTTAAAAGCCTGAAGTTCACTGATCCCGTCTCTATCCAATCTCTAGAAGATAAAATATCTGAAGAACACGTTACTTCAGAAGTAACTAGCCTTGAATGGATGAAGGAAGCTGCTTCTGATGTTATCAATAGGATTAGAAATTTGTTATCTTCTGCCTCTGGTATGCCACTCCCAGGACATGTTCTTATATATGGACCTTCAGGCTCTGGCAAAACTTTACTAGCAAGGACTGCTGCAAAATACTTTGAGAAACATGAAGACATCTTAGCACACATAATTTCTGTTTCTTGTTCAAAACTAGCTTTGGAGAATGTCCCAATAATCCGGAAAGAAGTTACTAACAACATTATCGAAGCTTTAGATCATGCACCTTCTATTGTCATCTTTGATGATCTTGATAGCATAATTTCCACCTCTGACTCAGAAGGGACTCAACCTTCAACGGCTGCTGCTGGACTTGCAGATTTTCTGGTTGACGTTATTGATGAATGTGGGGAGAGAAGGCAGAAATCATGTGGATTTGGACCAATAGCCTTCATAACTTCTGTACAAGCTCTCGAGAAGATACCACAGGCTTTAAGCTCTTCAGGGAGGTTTGACTTTCACATACAGTTGCCAACTCCTGCAGCTTCAGAGCGGGGGGCTATGTTGAGGCATGAAATAAAAAGGCGTCACTTGCAATGTGCTGATGACATCCTGCTTGATGTAGCGGTCAAATGTGACGGCTATGATGGTTATGATCTGGAAATATTGGTTGATAGAGCTGTCCACGCTGCTGTATCCCGCTTTCTCCCATCAAATGCTGCTCTTAATGAGCACGAGAGTCCTGCTTTACTTATGGAAGATTTCTCTCAGGCAATGCATGATTTTCTTCCAGTAGCGATGCGAGACATTACAAAAGCTGCTTCTGATGGTGGGCGCTCTGGATGGGATGATGTGGGAGGTTTTGTTCACATTCAAAACACTATTAAGGAGATGATAGAGATGCCTTCTAAGTTTCCAAAAACTTTTGCGCAAGCTCCTCTGAGGTTAAGATCAAATGTCCTTTTATATGGGCCTCCTGGCTGTGGCAAAACTCACATAGTTGGTGCTGCGGCCGCTGCTTGTTCTCTACGTTTCATATCTGTGAAAGGGCCAGAACTGTTGAACAAATACATTGGTGCTTCTGAACAAGCTGTTAGGGATATTTTCTCTAAAGCAGCTGCAGCAGCACCATGTCTACTCTTTTTTGATGAATTTGATTCTATTGCCCCCAAGAGAGGACATGACAATACTGGAGTTACTGATCGTGTTGTGAATCAGTTTCTGACTGAGTTAGATGGCGTTGAGATTTTAACAGGTGTATTTGTGTTTGCTGCTACCAGTAGACCAGATTTGCTTGATGCAGCACTTTTGAGACCAGGCAGGTTAGATCGACTTCTGTTCTGCGACTTTCCATCTCAGCAGGAAAGGTTTGAAATTCTCAGAGTGCTTTCTAGAAAGTTGCCCCTCGCCGGCGATGTTGATTTGGCTACAGTAGCTCATATGACTGAGGGATTTAGTGGAGCCGATCTCCAAGCTCTCCTTTCAGACGCACAACTTGCAGCAGTTCATGAAGTCTTGGACGATGTAAACGCCTCTAGCCCTGAGAAAAAGCCAGTTATTACAAACACTATTCTTAAGGGTACAGCCTCCAAGGCTAGACCGTCTGTTTCAAATGAAGAAAAAAGAAGACTTTATAGTATTTACAACCAGTTCCTTGATTCAAAGAGATCTGTTGCTTCTCAGTCAAGAGATGCAAAAGGCAAGAGGGCAACTCTAGCGTGA 2553 0.4144 MNTKGSSTTREVDSGNLTDVKGCQQAIVYLLLSESVAKGHVMVAKSLRQYLRVGLHSWVYLKACDVNLEKAIPSFSLSPCRFRMLRQDNDGDNNIDKNKLTRTAAGVFGDFADWSIHNGVINVFSDESHSEADEEVANQSVNQNGLQHLLRVWYIAQLDAVASFIGMDVNALVLGSKTLLHFEVSYIKLGTNGKVQLASNSLENRSKTAEILFLLTIGEDSLHHEKITAYEIALGERNKMNSNPADQQLFKSLKFTDPVSIQSLEDKISEEHVTSEVTSLEWMKEAASDVINRIRNLLSSASGMPLPGHVLIYGPSGSGKTLLARTAAKYFEKHEDILAHIISVSCSKLALENVPIIRKEVTNNIIEALDHAPSIVIFDDLDSIISTSDSEGTQPSTAAAGLADFLVDVIDECGERRQKSCGFGPIAFITSVQALEKIPQALSSSGRFDFHIQLPTPAASERGAMLRHEIKRRHLQCADDILLDVAVKCDGYDGYDLEILVDRAVHAAVSRFLPSNAALNEHESPALLMEDFSQAMHDFLPVAMRDITKAASDGGRSGWDDVGGFVHIQNTIKEMIEMPSKFPKTFAQAPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAAAAAPCLLFFDEFDSIAPKRGHDNTGVTDRVVNQFLTELDGVEILTGVFVFAATSRPDLLDAALLRPGRLDRLLFCDFPSQQERFEILRVLSRKLPLAGDVDLATVAHMTEGFSGADLQALLSDAQLAAVHEVLDDVNASSPEKKPVITNTILKGTASKARPSVSNEEKRRLYSIYNQFLDSKRSVASQSRDAKGKRATLA 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g3541 850 Pfam ATPase family associated with various cellular activities (AAA) 597 724 IPR003959 GO:0005524|GO:0016887
Alju01g3541 850 Pfam ATPase family associated with various cellular activities (AAA) 310 455 IPR003959 GO:0005524|GO:0016887
Alju01g3541 850 CDD RecA-like_PEX1_r2 568 725 - -
Alju01g3541 850 Gene3D - 458 537 - -
Alju01g3541 850 SMART AAA_5 306 458 IPR003593 GO:0016887
Alju01g3541 850 SMART AAA_5 593 729 IPR003593 GO:0016887
Alju01g3541 850 FunFam Peroxisome biogenesis protein 1 458 538 - -
Alju01g3541 850 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 279 537 IPR027417 -
Alju01g3541 850 Pfam AAA+ lid domain 749 788 IPR041569 -
Alju01g3541 850 ProSitePatterns AAA-protein family signature. 697 715 IPR003960 GO:0005524|GO:0016887
Alju01g3541 850 Gene3D - 261 457 IPR027417 -
Alju01g3541 850 Gene3D - 558 820 IPR027417 -
Alju01g3541 850 PANTHER AAA-FAMILY ATPASE 192 825 - -
Alju01g3541 850 FunFam Nuclear valosin-containing protein-like 555 734 - -
Alju01g3541 850 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 559 820 IPR027417 -
Alju01g3541 850 FunFam PeRoXisome assembly factor 728 804 - -
Alju01g3541 850 Gene3D - 728 807 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g3541 Alju-ChrAlju01 64257776 64279493 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g3541 591 790 Calmodulin-binding Proteins AT3G56690 38.806 1.23e-37 150