Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g3538 ATGGCTCTTGAACTTGTCGGCGGACCTTTCATGAGCGCCATTTTCAATGTGCTGCTTGAAAGGATAGCTTCTTCCGAAATAGCTGATTCATTCAAGAAGAATAGCTCCGAAAAGTTGCTCAGAAGGTTGAAGATAACCTTGTTGTCTGTTAATGCCGTTCTCAACGATGCGGAGGAGAAGCAAGTGAGAAATTCAGCTGTGAAGGAGTGGCTTGATGAGCTTAAAGATGTCGCGTTTGATGCTGATGATCTCCTCGATGAGATTTACACCAATGCGAACGAGGTAAAAACCCTTGATTCCGCTTCTATCAAGTTTTTCGATAGAATTGAGGTAGAACGGAAACTACAAGATGTTCTTGAAAGATTAGAATTTATCATAAAACAGAAAGAAGCCCTAGATTTAAAAGCTGGTAGAGAAGCCAAAATGGCCCAGAAGACACCTACTTCGTCTGTAATAGAGGCATGTGATGTGTACGGAAGGGACAATGATAAAGACGTCTTAGTTAAGTTGTTGTTGTCAAATGATGCTGATGATGAAAATGTAGGTGTCATTCCCATAGTGGGAATGGGAGGAGCTGGGAAAACCACTTTAGCTCAACTTATTTACAATGGTGATAGAGTACAGAAGGAATTTGACTTCAAAGCATGGATTTATGTGTCTGAAGAATTTGATATCTGTAAGATTACCAAAAACCTCTTGGAGACTATCACTTGTTCTAGTTGTGATATTGAAGATTTCAATTCACTCCAGCGCAATTTAAAAAGTTTGTTAATGAAGAAAAAGTTTTTGTTTGTGTTCGACGATGTCTGGAATGAGAATTATGATAACTGGGACAAGTTCAGCTGTCCATTTAAACATGCAGCTCAAGGAAGTAAGATTATTGTAACTACACGAAGTAGTTATGTTGCATCCATCATGCAAACTGTTCCAGCTTATAATCTCGGTGAGTTGTCAAATGAAGATTCTTGGCGTCTTTTTGCAAAACATGCATTTGGTTATAGAGATTCGAATATCAATCATGGTGTGGAGAAAGTGGGTAAAGAAATAGTTAGAAAGTGCAAAGGATTGCCTTTGGCAGTGAAGACGCTTGCAGGGCTTTTGAGAGCTAAAAGTGATAAGCAGGAGTGGTTGAAAGTATTAAGCAGTGAGATATGGGAGTTGCAAGACCATGAGAGTAATATTCTTCCAGCTTTGAGACTAAGTTATCATTATCTCCCTGCACATTTGAAAAGATGTTTTGCTTACTGCTCGATTTTCCCAAAAGATTATGAATTTGAGAAGGAGACGCTAACTTTGCTGTGGATGGCAGAAGGTTTGCTGCAGCAATCAAAACGACATAAAAGGATTGAAGATGCTGGATATGAATACTTTTTTGAATTAGCATCCAGATCATTTTTCCAGCAATCAAGACGTGATAAGACATGTTTTGTAATGCATCATCTTGTAAATGATTTAGCAAAATTTGCATCAGGGGACTTTTCTGTCAGAATTGAAGATAGCAATTCTAATGAAATTGGGGAAAGAACTCGTCATTTGTCGCATATTATTGCAGATAGTTCCTCCCATCTAAACATGAATGATGTTTGCAAAGCAAATCGTCTTCGCACCTTTCTGCAAATACAGTTGTTTTCTACCTCCATTGACTTGCTCAACAACATGCAAAATGATTTGTTGATGAAGTTAAGGCGCTTAAGGGTGTTAACATTGGTAGGTGTGTATTTGTACAATTTGCCTGATTCAATTGGCGAACTAAAACATCTTCGGTATCTAGAATTGTCTGACACAAAGATCATCAGGTTACCAAAATCCATCTCCAGCTTGTACAACTTACAAACACTGAAGTTAATTGGATGCTATAGTCTCATGGAACTGCCTAAAAGATTGCATGATCTTATTAACTTGCGTTACTTGGATATTACTGGCACTTGTTTGAAATGGATGCCGTTGCACATGAGCAAGTTAAGAAACCTCCAAAAGTTGAGTGATTTCTTTCTAGGACATCAACCCGGATCTGTCATTGGTGAATTGGGAGAACTATATGATTTACATGGATCATTGTTCATTCATGGCTTAGAACATATTGTTGACCACAAGGATTCTGAAAGAGCAAAGTTGAAGGAAAAGAGTTGTCTTGACAAATTATCTTTGGATTGGTGTGGGAGTGGTGATACTGATGATTCACAGCTGGAGAGAAAAATACTGGCCAGCCTACAACCAAATACAAATTTGAAGGAGCTTGTTATTCATGGCTATCCAGGCACAGAATTTCCCAAATGGATAGGGGACAATTCCTTCTTCAACATGATGTCTTTACAACTTAAGGGGTGTAAATATTGCTGTAAGTTACCAGCACTTGGACAGCTCCCATCATTGAAAGAGCTTCGAATCAGTAGATTTGACGGATTAGTCAGCATTGGCACCGAGTTTTTTGGCAATGGAACTCATTATTCTGCTGTAACTAAAATCTTCCCTGCACTTGAAATTCTGAGATTGGAGCATATGTCTGCGTGGGAAAAATGGAGTCATGATGCTGACACTGGCTTCAGGGCTTTCAGCCAACTTCGAGAACTTCATATACAGAGTTGTGCCAAGCTGACAGGGGATTTACCTTGTAACCTTCCATCTTTGAAGCTACTCATGATCACAGACTGCAATCAGCTTCTTTGTTCACTTCCCACTGCTCATGATTTGCGCGTATTGAACATTCAGAATTGTGGGAATTTAGCATTCCCAGTAAATGGTCCTCACTGCTACCAGTTACTCACATCCATGTACTTGCTTGATAGCTTTGATTCACTCAAGTTCTTGCCATTAGATCTCTCCCCAAACCTCAAGTCTTTAGATATATGGGGCTGTAAGAATCTGGAAGCTCTTACTGTTTCTGAATCAGATGCAGCTTCTCCTCCAAATGTCCCATCATTAAGATCCTTAAGCATTAGACATTGTCCAAAACTTGCATCTTTTCCCAAGGGAGCATTATCAGCCCCAAAACTGACTTTACTGACAATCAACTACTGCGAGAAGTTGAAGTCTCTACCCGAGCAAATGCACCGTCTGATGCCAAGTTTGAAGGAAGTCCAGCTTCGTGGTTGTCCACTAATGGAGTCATCTGATGTGAGACCCCTCAGGATTCGGATTTGTGATAAACTGAGAGAGGAGAAACAAAATCTATCTGATCCTGTCTTTGCTAGTTTTAAGGGACTCTCACCTATTTGTAGCCCCTCATCTAGGTAG 3234 0.397 MALELVGGPFMSAIFNVLLERIASSEIADSFKKNSSEKLLRRLKITLLSVNAVLNDAEEKQVRNSAVKEWLDELKDVAFDADDLLDEIYTNANEVKTLDSASIKFFDRIEVERKLQDVLERLEFIIKQKEALDLKAGREAKMAQKTPTSSVIEACDVYGRDNDKDVLVKLLLSNDADDENVGVIPIVGMGGAGKTTLAQLIYNGDRVQKEFDFKAWIYVSEEFDICKITKNLLETITCSSCDIEDFNSLQRNLKSLLMKKKFLFVFDDVWNENYDNWDKFSCPFKHAAQGSKIIVTTRSSYVASIMQTVPAYNLGELSNEDSWRLFAKHAFGYRDSNINHGVEKVGKEIVRKCKGLPLAVKTLAGLLRAKSDKQEWLKVLSSEIWELQDHESNILPALRLSYHYLPAHLKRCFAYCSIFPKDYEFEKETLTLLWMAEGLLQQSKRHKRIEDAGYEYFFELASRSFFQQSRRDKTCFVMHHLVNDLAKFASGDFSVRIEDSNSNEIGERTRHLSHIIADSSSHLNMNDVCKANRLRTFLQIQLFSTSIDLLNNMQNDLLMKLRRLRVLTLVGVYLYNLPDSIGELKHLRYLELSDTKIIRLPKSISSLYNLQTLKLIGCYSLMELPKRLHDLINLRYLDITGTCLKWMPLHMSKLRNLQKLSDFFLGHQPGSVIGELGELYDLHGSLFIHGLEHIVDHKDSERAKLKEKSCLDKLSLDWCGSGDTDDSQLERKILASLQPNTNLKELVIHGYPGTEFPKWIGDNSFFNMMSLQLKGCKYCCKLPALGQLPSLKELRISRFDGLVSIGTEFFGNGTHYSAVTKIFPALEILRLEHMSAWEKWSHDADTGFRAFSQLRELHIQSCAKLTGDLPCNLPSLKLLMITDCNQLLCSLPTAHDLRVLNIQNCGNLAFPVNGPHCYQLLTSMYLLDSFDSLKFLPLDLSPNLKSLDIWGCKNLEALTVSESDAASPPNVPSLRSLSIRHCPKLASFPKGALSAPKLTLLTINYCEKLKSLPEQMHRLMPSLKEVQLRGCPLMESSDVRPLRIRICDKLREEKQNLSDPVFASFKGLSPICSPSSR 1077
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g3538 1077 Gene3D Ribonuclease Inhibitor 699 869 IPR032675 -
Alju01g3538 1077 Gene3D Ribonuclease Inhibitor 870 1048 IPR032675 -
Alju01g3538 1077 SUPERFAMILY L domain-like 478 886 - -
Alju01g3538 1077 Pfam NB-ARC domain 176 402 IPR002182 GO:0043531
Alju01g3538 1077 Coils Coil 40 60 - -
Alju01g3538 1077 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 146 416 IPR027417 -
Alju01g3538 1077 Gene3D - 16 124 - -
Alju01g3538 1077 Gene3D - 138 310 IPR027417 -
Alju01g3538 1077 Gene3D - 401 488 IPR036388 -
Alju01g3538 1077 FunFam Probable disease resistance protein At1g61300 140 310 - -
Alju01g3538 1077 Pfam Rx N-terminal domain 10 96 IPR041118 -
Alju01g3538 1077 PRINTS Disease resistance protein signature 353 367 - -
Alju01g3538 1077 PRINTS Disease resistance protein signature 256 270 - -
Alju01g3538 1077 PRINTS Disease resistance protein signature 183 198 - -
Alju01g3538 1077 PRINTS Disease resistance protein signature 871 887 - -
Alju01g3538 1077 PANTHER DISEASE RESISTANCE PROTEIN RP 40 876 IPR044974 GO:0006952
Alju01g3538 1077 Gene3D - 316 400 IPR042197 -
Alju01g3538 1077 FunFam Probable disease resistance protein At1g63360 402 488 - -
Alju01g3538 1077 SUPERFAMILY RNI-like 821 1035 - -
Alju01g3538 1077 Gene3D Ribonuclease Inhibitor 518 685 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g3538 Alju-ChrAlju01 64226959 64230192 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g3538 564 660 WRKY Transcription Factor Family AT4G12020 34.694 4.29e-07 52.4