Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g3525 ATGATCATGTGCGAGCCTAAAACGAGCTCGAATAAATTGTTGGCGATATTCATTTGGTTAGGTATTGTGGCGGCGCCTTTGAGCTTCTTCAATGTGATAAATTGCCAAGATACCGTCGTCGACATCGATGACTACGACCAACAAATCCACAATCCAGCTGTTCTTCCCCTCGTTACGCAGCTTGTGTACTCTCGAATTTCAAATCTCACCTCCCTTCTCAGTCAAGAAATCGGTCATCGCTCCAGTTTCTGCGTCAAAGATCCGGAAAATGAGTGGAACCAAGCATTTAACTTCTCTTCAAATTTGGACTTCTTGAGTTCTTGCATTCAAAAAACCAAAGGTGATGTCACAAAACGCTTGTGTACAGCAGCAGAGATGAGGTTTTACTTCAACAGTTTTTTTGAAAGTCCAAGAAGTGCCAATTTCTTAAAGCCTAACAAGAACTGCAATTTAACCTCATGGGTTTCTGGTTGTGAGCCAGGATGGGCCTGTAGTGTTGGTTCACAACAGCAGGTTGACCTTCAGAATTCAAAGGAGATACCTGCAAGAACTACAAGTTGTCAGGCATGTTGTGAGGGCTTTTTTTGTCCCCAGGGCCTCACTTGCATGATACCTTGTCCGCTAGGTTCCTATTGCCCTCTTGCAAGACTCAATGAAACAACTGGTGTATGTGAACCATATCTTTACCAGTTGCCTCCAAATCAGCCAAACCATACGTGCGGAGGAGCGAATATTTGGGCTGATTTTAGTAGCAGTATTGAGATATTTTGTTCGGCTGGATCATACTGTCCAACAACCACCAAAAGAGTCCCTTGCAGTAGTGGGCACTATTGCAGGACGGGTTCTACATCTGAGAAAAGATGCTTCAAGTTGAGTTCATGTAATTCAAAAACAGCAACCCAAAACCTGCATGCATATGGAATTATGCTCATTGCTGCTTTGAGTACTTTGCTACTCATTATTTACAACTTTTCTGACCAAGTTCTCGCAATTAGGGAAAGGCGAGTGACTGAATCCAGAGAAGCAGCAGCTAGAAGTGCAAGGAAGACCGCAAATGCACGCCAAAGATGGAAATTTGCAAAAGATGCTGCTAAGAAGCATGCAAGTGGGCTACAAGCTCAACTATCACGCACATTTTCTCGTAATAAGAAGTTAGCATCACATTCAGGAAAACTTCAAATTTCGGATCAGGAAGCTTCAGAAACAAATGTTGAAATTTTGCCAGCGGATTCTATCACTTCATGCCCTGTTCCTTCATCTGCAGGGCCACATGAAACGAGAAAAGAACCCAGGAATCTGAGGCAGATGATAGAAAATGACCAAGACAATGATGAAAACTTCAATGTAGGAAGTGAAGAAAGAAGTTTAAAGCAGAAAATGCCCAAGGAGAAACAATTGATTACTCATACCCAGATTTTTAAGTATGCTTATACTCAACTTGAAAAGGAGAAGGCACAGCAACAAGAAAACAAGAATCTTACCTTCTCAGGGGTAATTAGAATGGCTATCAACAGTGAGCAGAGAAAAAGGCCATTAATTGAGATTTCTTTCAAAGATCTCACTCTCACTTTGAAATCAAAAAGAAAGCATATATTGAGATGTGTTACAGGTAAAATTAAACCTGGACGCATTACTGCTGTCATGGGTCCTTCAGGTGCAGGTAAGACAACATTTCTTTCAGCTCTAGCCGGGAAAGCACATGGATGCAGAGCAACTGGTTTAATTCTTATAAATGGAAAGAATGAATCTATCCACTCCTACAAGAAAATTATTGGCTTTGTGCCACAAGATGATATAGTTCATGGAAACCTTACAGTGGAAGAGAACCTTTGGTTCAGTGCACAGTGCAGGTTATCCTCTAACTTGTCAAAACCAGATAAAGTTCTAGTTGTTGAAAGAGTTATTGAATTCCTGGGACTTCAGTCAGTGAGAAATTCCTTGGTTGGTACTGTGGAAAAGCGAGGAATCTCTGGAGGCCAAAGGAAACGTGTAAACGTTGGGTTGGAGATGGTCATGGAACCTTCACTTTTGATCTTAGATGAACCCACATCTGGTTTGGACAGTGCATCGTCTCAACACCTTCTTAGAGCACTTAGACGTGAAGCTCTTGAGGGGGTGAACATTTGCATGGTCGTGCACCAACCCAGCTATGCCTTGTTCAAGATGTTTGATGATTTAATTCTTCTGGCAAAAGGTGGTCTTACTGTCTATCATGGAACAGTCAAGAAGGTTGAAGGGTACTTTGCAGGCCTCGGGATCAATATCCCAGAACGGATTAATCCTCCAGACCACTTCATTGACATTCTGGAGGGTATAGCAGTACCTGGTGGAGGCTCAGGTGTGAGCTATAAAGAGCTTCCAATTAGATGGATGCTTTATAATAATTACCCAATACCTTCTGATATGCAGCAGATAAGTGTATATAACTTTGATGTATCACCTCAAAGTGTGAACACAGCTAATGAACAGACTTTTGCTGGAGAATTATGGCAAGATGTTAAACACAGTGTGGAATTGCAGAGCGAGAAGATTAGACTTAATTATTATTCAAAGTCCGAGGAATTATCTAGCAGGAAAACTCCTGGCGTGTTCAAGCAATATAAGTACTTTCTAATAAGGGTTGGTAAGCAGAGACTAAGGGAAGCTAGTATTCAAGCTATAGATTACCTGATTTTATTACTAGCCGGAGCTTGCTTAGGATTGCTCACAAAAGCAAGTGAACAAACTTTTGGTGCAGCTGGCTACACATACACTATCATTGCTGTCTCTCTTCTATGCAAAATAGCAGCCTTGAGATCTTTTTCTCTGGACACAATACAAAACTGGAGGGAGAGAGATGCGGGCATGAGCAGCTTGGCTTATTTTCTGTCCAAGGACACAATTGATCATTTTAATACAGTGATCAAGCCTTTGGTCTACCTCTCCATGTTCTATTTCCTCACCAATCCAAGATCTTCTTTTGCAGATAACTATATTGCGCTTCTCTGTCTCGTATACTGTGTCACTGGCATAGCTTATGCACTGGCCATGCTCTTTGAGCCTGGTGCTGCCCAGCTTTGGTCAGTACTTCTTCCAGTTGTTTTAACTCTTATTGCAACAAAACAAAAGGATAGTAACTTTCTGAAGGGTATAGCTAATGTTTGCTATTCTAAGTGGGCTCTGCAAGCATTTGTTATTGCAAATGCTGAGAGGTATCATGGAGTATGGCTCATAACTCGATGTGGATCACTTAAGGAAAGTGGCTATAATCTTCATGATTGGAATTTGTGCATGTTAATCCTCATTTGTATGGGCATGATCAGTCGAGTTGTGGCATTCCTCTGTATGGTCACTTTTCAAAAGAAGTGA 3348 0.4152 MIMCEPKTSSNKLLAIFIWLGIVAAPLSFFNVINCQDTVVDIDDYDQQIHNPAVLPLVTQLVYSRISNLTSLLSQEIGHRSSFCVKDPENEWNQAFNFSSNLDFLSSCIQKTKGDVTKRLCTAAEMRFYFNSFFESPRSANFLKPNKNCNLTSWVSGCEPGWACSVGSQQQVDLQNSKEIPARTTSCQACCEGFFCPQGLTCMIPCPLGSYCPLARLNETTGVCEPYLYQLPPNQPNHTCGGANIWADFSSSIEIFCSAGSYCPTTTKRVPCSSGHYCRTGSTSEKRCFKLSSCNSKTATQNLHAYGIMLIAALSTLLLIIYNFSDQVLAIRERRVTESREAAARSARKTANARQRWKFAKDAAKKHASGLQAQLSRTFSRNKKLASHSGKLQISDQEASETNVEILPADSITSCPVPSSAGPHETRKEPRNLRQMIENDQDNDENFNVGSEERSLKQKMPKEKQLITHTQIFKYAYTQLEKEKAQQQENKNLTFSGVIRMAINSEQRKRPLIEISFKDLTLTLKSKRKHILRCVTGKIKPGRITAVMGPSGAGKTTFLSALAGKAHGCRATGLILINGKNESIHSYKKIIGFVPQDDIVHGNLTVEENLWFSAQCRLSSNLSKPDKVLVVERVIEFLGLQSVRNSLVGTVEKRGISGGQRKRVNVGLEMVMEPSLLILDEPTSGLDSASSQHLLRALRREALEGVNICMVVHQPSYALFKMFDDLILLAKGGLTVYHGTVKKVEGYFAGLGINIPERINPPDHFIDILEGIAVPGGGSGVSYKELPIRWMLYNNYPIPSDMQQISVYNFDVSPQSVNTANEQTFAGELWQDVKHSVELQSEKIRLNYYSKSEELSSRKTPGVFKQYKYFLIRVGKQRLREASIQAIDYLILLLAGACLGLLTKASEQTFGAAGYTYTIIAVSLLCKIAALRSFSLDTIQNWRERDAGMSSLAYFLSKDTIDHFNTVIKPLVYLSMFYFLTNPRSSFADNYIALLCLVYCVTGIAYALAMLFEPGAAQLWSVLLPVVLTLIATKQKDSNFLKGIANVCYSKWALQAFVIANAERYHGVWLITRCGSLKESGYNLHDWNLCMLILICMGMISRVVAFLCMVTFQKK 1115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g3525 1115 SMART AAA_5 541 733 IPR003593 GO:0016887
Alju01g3525 1115 Pfam ABC transporter 534 684 IPR003439 GO:0005524
Alju01g3525 1115 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 515 757 IPR003439 GO:0005524
Alju01g3525 1115 MobiDBLite consensus disorder prediction 411 432 - -
Alju01g3525 1115 FunFam ABC transporter G family member 24 509 751 - -
Alju01g3525 1115 Gene3D - 502 752 IPR027417 -
Alju01g3525 1115 CDD ABCG_EPDR 513 739 - -
Alju01g3525 1115 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 259 1103 - -
Alju01g3525 1115 Pfam ABC-2 type transporter 713 1115 IPR043926 GO:0140359
Alju01g3525 1115 ProSitePatterns ABC transporters family signature. 656 670 IPR017871 GO:0005524|GO:0016887
Alju01g3525 1115 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 514 737 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g3525 Alju-ChrAlju01 64008233 64019496 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g3525 539 745 Calmodulin-binding Proteins AT2G36910 25.541 2.81e-08 56.2