Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g3522 ATGGGAAATGTTGAAATTCCCAATTGGCTAAAAGACTTGCCATTGGCTCCGGAATTTCGCCCTACTGATACCGAATTCGCCGACCCAATTGCTTACATTTCAAAGATAGAGAAAGAAGCTAGCGCTTTTGGGATATGTAAGATTATCCCTCCGTTACCCAAGCCTTCTAAAAGATATGTCTTCTCTAATTTAAACAAGTCTCTTTTGAAGATCCCGGAATTGGCTTCAGATAGTAATTCAGTTGGAGTTAGTAATTCTTTGAAAATTATTTCTGGCGATGGTGGTAGTGATGGGGAGGCTCGGGCTGTGTTTACCACAAGGCATCAAGAATTGGGGCAGAGTATTAAAAGAACCAAAGGAACAATTCAAAGCCCACTTTCAGGTGTTCATAAACAAGTATGGCAGAGTGGGGAAATTTATACACTTGAACAGTTTGAGTCTAAATCAAAGGCTTTTGCAAGAAGTGTACTAGGTATGGTTAAGGAGGTTTCTCCGCTGGTTATAGAGGCTATGTTTTGGAAGGCAACTTCTGAGAAGCCTATATATGTGGAGTATGCCAATGATATGCCTGGTTCTGCTTTTGGGGAATCCGAGGGTCAATTTCATTATATTCATAGAAGGCGAAGGAAAAAGGCTTATTATCAAAGGAGTCTAGATACCTCAGATTGTCAAGAACCCGAAATGGATGAAATAAAAGATACCCAGACTGGCGAAATTAAGGATGCCTCTGCCCATAATCATGCTGACTCATGCTTACGGGCATCAAATTCAACTTCAAATCTGTCAACATTTTCATCAAATGAAGCCCCGCATTCTATTAGGCCGAAGAGCTCAGATTCCAGCAATGAGGTGGAAGGTACTGCTGGTTGGAAGCTTTCAAACAGTCCTTGGAACTTACAAGTCATTGCACGTTCACAGGGCTCGCTAACGCGTTTCATGCCAGATGATATTCCTGGTGTCACTTCCCCCATGGTATACATTGGTATGCTGTTCAGTTGGTTTGCGTGGCACGTAGAGGATCATGAACTTCATAGCATGAATTTTCTTCACATTGGCTCTTCAAAGACTTGGTATGCTGTTCCTGGAGATTATGCCTCTGCTTTCGAGGAACTCATCCGCACTGAGGTTTATGGTGGTAATATTGATCACTTAGCTGCTCTGACTCTGTTGGGGGAGAAGACAACCCTTCTATCACCGGAGGCAGTTGTTGCATCTGGGATCCCTTGTTGCAGGTTGACGCAGAACCCTGGAGAATTTGTTGTGACCTTTCCAAGGGCTTATCATGTAGGATTCAGCCATGGCTTTAACTGTGGGGAAGCTGCTAACTTTGGAACTCCACAATGGCTCACAGTAGCCAAGGAAGCTGCAGTGCGTAGGGCTGCAATGAATTATCTTCCCATGCTTTCTCATCAGCAACTGCTTTACTTATTGACTATGTCTTTTGTTTCAAGGGTGCCAAGAGCGTTATTACCAGGTGTGCGGAGTTCCCGTCTGAGAGACCGTCAAAAAGAAGAAAGAGAATTGTTAGTAAAAAGATCTTTTATAGAAGATATGCTGCAAGAAAACAAGTTGCTATCCATTCTTCTTGGAAAGCAATCAACTTATCATGCTGTTTTATGGAATGCTGATTTACTCCCAGATTCGAGCAAGGATTCTCCTCAGATGCCTGACTTAACTTCTACAACTAGAACCTCTATGGAAGACAAGTCAAATTTGAGTTCTGCTGATAAGAGCAACTACAGTTGTCTGTTTGATGAAATGAGCTTGTATATGGAGAATTTGACTGAATTTTATATCGGTGATGACAGTCTTCCATGTCACTTCCAAACTGATTCAGGAGCATTGGCATGTGTGGGTTGTGGAATTCTTGGTTTTCCATTCATGGTTGTGGTACAACCATCAGAGAGATCAGCAATGGAACTTCTGCCAGTCTCAGGGAATGCTCCTTCTGTTACTGATCGACCTTCAACAAATGAACCATCGAAACTATCATTAATGAACTGTGACAAGGGTTGGAACACCTCTTGTAAATTTTTGAGGCCACGAATTTTCTGCCTGGAGCATGCTGTTCAGATTATGGAGATGCTGCATTGTAAAGGTGGAGCTAGTGTGCTTGTAATTTGCCATTCAGACTACCAGAAAATCAAGGCACATGCCGGGGCAGTCGCAGATGAGATAGGCTATGCTTTTCATTATAATGAGGTTCCTTTAGAGACTGCATCCCCTGAAGATTTGACCTTAATAGATCTTGCGATTGATGGTGAAGAATACAATGAATGTGAAGAAGACTGGACATCTAAATTAGGAATTAACCTGCAGTATTGTGTCAAGGCAAGAAAGAACTCTGCATATAAACAAGCTCCTTTCAAATTGACACTGGGAATGTTGTTCCCTGAGAAGTTTCCTGATTCAGATGTCTTTTCTGTAAATTGGCGGTCAAAGAGATTTCGCTCCAGAAGGTTGAAGTATTTAGCTCAGGCGAAAGCATGCCAGAGAAAGAAGGATGATCGGTTGGAAGGAAAGACTGATGGCTCCCCTGCTAAAAAGATGCTTCAGTATTCAAGGAGAAAGTTCAGGTCAAAGCAAGGTTGTTTCTCTGGATCAAACATGGTTCCTGTACCCCATAAAGAGTCCATAAATGTGCCAGCTGTCTTGAGTGGAGATTCTGGTATCCAGGCTCCTGGAAATAAGCCTGACACTGAGAATTCTAAGAGTGTTGTGCAACCTTCAGATTTCACTCGGGAACCTATGTCAGTGGATGAAAATACTGGACCAGGGTTCCGGAATCAAACTACAATGGAATTAAAGATAGATGGCAAAAGTAGGTGCGCAACACCTGATCATTCTATGATGCCCTGTAAGATGGGTGCCTCAGAAATTGGTAACAAGGACAATGAGATTTTGCATGACAAGATAAATTCTAGCTCACTCAACGTTGCTAAAGACAAAAATATTGACATGCTTAATGAGAACCTTATCTCTGAAGCAATTAACACCAATTGTAGCAATAGCCTGGATTCCAATGAAGCACATCAAGAATATGAGCCCACTCACAAGAGTAATAGGGTAGAAGCTACTTCATCTCCTGTTTCATCAGTAACTGAGCAGACACTTGCCTCCATGGAAGAAAATTCTGACAGTGCTAAAAAGGATTGTATTACTGAAAGCATGAGCTATGGTGCATCCTTAAAAGAGACAACAGACACTTCTTGTATGAATGCAAACAACATGGAACCTACTGTAAGTTGTGATAAATCAATAAATAAGCCGATGTCAAAGATTGATGCTCATGAAGTTCCAAAAGAGCTTTGTGCTTCTGCAGACTCCAGCCCTCAATCTACTTCAGATGTGAGAAAAGAACCCGAAATCCATCCGAAAAGCATGAATGATGAGGAAATCTGCTCTGGTTCCGGTGCTGGGCCATCATTAAAGGACTCTTCTGTGTCAATCCGGGATCGTTCTGCAACTGAGGGGGAGAAATGTGTAAGAGATGGCTTAAATGGAAGCAAAGTTCCTTCTTCACAAGAGCATAGGGAGCTGCCAAGCTTTGAAAAGAAACAGAAGAAAAGAAACAGGGAATTGGAACGGATACAAGAGATCAATACAAGTTTCCTTGGCTTTGTTAGAAGTCCATGTGAAGGGTTGAGACCGAGGGCTTACAAAGTAGCCTCTGGCCGAAGCATGGCCGAAACCAGCAATTCTGTGGAGGAAAATCGAGAGGTTAAAAGGGCTAGGAGGAAATCATCAGATGTGTTGGTGTCTAGCAAGAATAAGAAGAATGCTGTTAAGAAGTCTCACAAGTGTGACCTTGATGGTTGCCATATGAGTTTTACGACCAAGGCTGATTTGATGTTACACAAGCGCAACCGCTGCCCTTATGATGGGTGTGGAAAGAAGTTCAGGTCCCACAAATATGCTGTGCTTCACCAGCGTGTCCATGATGATGATAGGCCCCTCAAGTGCCCATGGGAAGGTTGCTCAATGTCATTCAAGTGGGCATGGGCTAGGACCGAGCATATACGGGTGCATACTGGGGAAAAGCCGTACCACTGCAAGGTTGAGGGATGTGGCCTTTCGTTCAGATTTGTATCTGATTATAGCAGGCACAGGCGAAAAACCGGGCACTATGTAAAGTCAGATGATTGA 4146 0.4286 MGNVEIPNWLKDLPLAPEFRPTDTEFADPIAYISKIEKEASAFGICKIIPPLPKPSKRYVFSNLNKSLLKIPELASDSNSVGVSNSLKIISGDGGSDGEARAVFTTRHQELGQSIKRTKGTIQSPLSGVHKQVWQSGEIYTLEQFESKSKAFARSVLGMVKEVSPLVIEAMFWKATSEKPIYVEYANDMPGSAFGESEGQFHYIHRRRRKKAYYQRSLDTSDCQEPEMDEIKDTQTGEIKDASAHNHADSCLRASNSTSNLSTFSSNEAPHSIRPKSSDSSNEVEGTAGWKLSNSPWNLQVIARSQGSLTRFMPDDIPGVTSPMVYIGMLFSWFAWHVEDHELHSMNFLHIGSSKTWYAVPGDYASAFEELIRTEVYGGNIDHLAALTLLGEKTTLLSPEAVVASGIPCCRLTQNPGEFVVTFPRAYHVGFSHGFNCGEAANFGTPQWLTVAKEAAVRRAAMNYLPMLSHQQLLYLLTMSFVSRVPRALLPGVRSSRLRDRQKEERELLVKRSFIEDMLQENKLLSILLGKQSTYHAVLWNADLLPDSSKDSPQMPDLTSTTRTSMEDKSNLSSADKSNYSCLFDEMSLYMENLTEFYIGDDSLPCHFQTDSGALACVGCGILGFPFMVVVQPSERSAMELLPVSGNAPSVTDRPSTNEPSKLSLMNCDKGWNTSCKFLRPRIFCLEHAVQIMEMLHCKGGASVLVICHSDYQKIKAHAGAVADEIGYAFHYNEVPLETASPEDLTLIDLAIDGEEYNECEEDWTSKLGINLQYCVKARKNSAYKQAPFKLTLGMLFPEKFPDSDVFSVNWRSKRFRSRRLKYLAQAKACQRKKDDRLEGKTDGSPAKKMLQYSRRKFRSKQGCFSGSNMVPVPHKESINVPAVLSGDSGIQAPGNKPDTENSKSVVQPSDFTREPMSVDENTGPGFRNQTTMELKIDGKSRCATPDHSMMPCKMGASEIGNKDNEILHDKINSSSLNVAKDKNIDMLNENLISEAINTNCSNSLDSNEAHQEYEPTHKSNRVEATSSPVSSVTEQTLASMEENSDSAKKDCITESMSYGASLKETTDTSCMNANNMEPTVSCDKSINKPMSKIDAHEVPKELCASADSSPQSTSDVRKEPEIHPKSMNDEEICSGSGAGPSLKDSSVSIRDRSATEGEKCVRDGLNGSKVPSSQEHRELPSFEKKQKKRNRELERIQEINTSFLGFVRSPCEGLRPRAYKVASGRSMAETSNSVEENREVKRARRKSSDVLVSSKNKKNAVKKSHKCDLDGCHMSFTTKADLMLHKRNRCPYDGCGKKFRSHKYAVLHQRVHDDDRPLKCPWEGCSMSFKWAWARTEHIRVHTGEKPYHCKVEGCGLSFRFVSDYSRHRRKTGHYVKSDD 1381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g3522 1381 SUPERFAMILY Clavaminate synthase-like 291 457 - -
Alju01g3522 1381 ProSiteProfiles Zinc finger C2H2 type domain profile. 1349 1380 IPR013087 -
Alju01g3522 1381 Pfam JmjC domain, hydroxylase 324 443 IPR003347 -
Alju01g3522 1381 SUPERFAMILY beta-beta-alpha zinc fingers 1290 1326 IPR036236 -
Alju01g3522 1381 PANTHER LYSINE-SPECIFIC DEMETHYLASE 8 1315 - -
Alju01g3522 1381 SMART c2h2final6 1319 1343 IPR013087 -
Alju01g3522 1381 SMART c2h2final6 1266 1288 IPR013087 -
Alju01g3522 1381 SMART c2h2final6 1349 1375 IPR013087 -
Alju01g3522 1381 SMART c2h2final6 1289 1313 IPR013087 -
Alju01g3522 1381 ProSitePatterns Zinc finger C2H2 type domain signature. 1321 1343 IPR013087 -
Alju01g3522 1381 Gene3D Classic Zinc Finger 1287 1373 - -
Alju01g3522 1381 MobiDBLite consensus disorder prediction 893 907 - -
Alju01g3522 1381 ProSitePatterns Zinc finger C2H2 type domain signature. 1291 1313 IPR013087 -
Alju01g3522 1381 MobiDBLite consensus disorder prediction 885 907 - -
Alju01g3522 1381 FunFam Probable lysine-specific demethylase ELF6 1316 1345 - -
Alju01g3522 1381 ProSiteProfiles JmjN domain profile. 16 57 IPR003349 -
Alju01g3522 1381 SUPERFAMILY beta-beta-alpha zinc fingers 1329 1371 IPR036236 -
Alju01g3522 1381 MobiDBLite consensus disorder prediction 1021 1043 - -
Alju01g3522 1381 MobiDBLite consensus disorder prediction 1104 1191 - -
Alju01g3522 1381 ProSiteProfiles JmjC domain profile. 291 460 IPR003347 -
Alju01g3522 1381 SMART JmjN_1 15 55 IPR003349 -
Alju01g3522 1381 MobiDBLite consensus disorder prediction 550 575 - -
Alju01g3522 1381 MobiDBLite consensus disorder prediction 1115 1129 - -
Alju01g3522 1381 MobiDBLite consensus disorder prediction 1233 1250 - -
Alju01g3522 1381 Gene3D Cupin 9 464 - -
Alju01g3522 1381 ProSitePatterns Zinc finger C2H2 type domain signature. 1351 1375 IPR013087 -
Alju01g3522 1381 SMART cupin_9 291 460 IPR003347 -
Alju01g3522 1381 MobiDBLite consensus disorder prediction 1004 1047 - -
Alju01g3522 1381 Pfam jmjN domain 17 50 IPR003349 -
Alju01g3522 1381 MobiDBLite consensus disorder prediction 1177 1191 - -
Alju01g3522 1381 ProSiteProfiles Zinc finger C2H2 type domain profile. 1289 1318 IPR013087 -
Alju01g3522 1381 MobiDBLite consensus disorder prediction 1150 1164 - -
Alju01g3522 1381 ProSiteProfiles Zinc finger C2H2 type domain profile. 1319 1348 IPR013087 -
Alju01g3522 1381 MobiDBLite consensus disorder prediction 1229 1250 - -
Alju01g3522 1381 MobiDBLite consensus disorder prediction 257 287 - -
Alju01g3522 1381 MobiDBLite consensus disorder prediction 552 575 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g3522 Alju-ChrAlju01 63984193 63991551 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g3522 1 857 C2H2 Transcription Factor Family AT5G04240 58.200 0.0 972
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Alju01g3522 JmjC 3.9e-36 CL0029
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g3522 01 63984193 63991551 Alju01g3522 01 63984193 63991551 ECH