Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g3518 ATGGAATTTTCGAAGGTCAATGGCGGTAATAATGGCACCTTTAACCTTTGTAATGGTGACCCTCTGAACTGGGGGATGGCGGCGGAGGCTCTGAAGGGGAGCCATTTGGACGAGGTGAAGCGGATGGTAGAGGAGTACCGGAAGCCGGTGGTGCAAATCGCCGGCAAGTCGCTGAGGATATCGCAGGTTGCGGCGATTGCTAACCATGACGCCGGCGTGGCGGTGGAGCTGTCGGAGGAGGCTCGTGCCGGCGTGAAGGCCAGCAGTGACTGGGTCATGGAAAGCATGAACAAAGGCACTGACAGCTATGGTGTCACCACCGGCTTCGGGGCCACCTCACACCGGAGAACCAAGCAGGGTGGGGCCCTCCAGAACGAGCTCATCAGATTCTTGAATGCTGGAATCTTCGGCAATGGCACAGAATCATCTCACATTTTGCCTCACACCGCCACAAGAGCCGCCATGTTGGTCAGAATCAACACTCTTCTTCAAGGATATTCCGGCATCAGATTTGAGATCTTGGAAGCCATGACCAAGTTCCTTAACCACAACATTACCCCATGCCTCCCTCTCCGGGGCACAATCACTGCTTCCGGCGACCTCGTCCCTCTCTCCTACGTCGCCGGCCTCTTGATCGGCCGCCCCAACTCCAAATCCATGAGCCCCGACGGCAGAGTCCTCTCCCCTGAAGAAGCCTTCCAACTCGCCGGAATCAAAGGAGGTTTCTTTGAACTTCAGCCCAAGGAAGGCTTAGCTCTTGTTAATGGCACTGCCGTAGGTTCTGCTTTAGCTTCCATCGTTCTTTTCGAGGCAAACATCCTCGGTATCCTGTCGGAAGTCTTGTCAGCGATTTTCGCCGAGGTTATGCAGGGGAAGCCGGAGTTTACCGACCACTTGACACATAAACTCAAACACCACCCTGGCCAAATTGAGGCTGCTGCTATAATGGAACACATTTTAGATGGAAGCTCTTATGTTAAAGCAGCTCAAATGCTTCACGAGATTGATCCTCTTCAGAAGCCTAAACAAGATAGGTATGCTCTGAGAACTTCTCCTCAATGGCTCGGGCCTCAGATCGAAGTGATAAGGCACGCGACGAACATGATCGAGAGAGAGATAAACTCTGTAAACGACAATCCATTGATTGATGTTTCAAGAGGGAAAGCACTTCATGGAGGGAACTTTCAAGGTACTCCAATTGGTGTTTCTATGGACAACACTCGCTTGGCCCTTGCTTCCATTGGAAAACTCATCTTTGCTCAATTCTCTGAGCTTGTCAATGACTTCTACAACAATGGTTTGCCTTCGAATCTCTCCGCGAGCCGACACCCGAGCTTGGATTACGGCTTCAAAGGAGCCGAAATCGCCATGGCTTCGTATTGTTCAGAGATTCAATTCCTTGCCAACCCTGTAACCAATCATGTTCAGAGTGCAGAGCAACACAACCAAGATGTTAACTCTTTAGGGCTAATTTCTTCAAGAAAAACAGCTGAAGCTGTTGAGATTCTCAAGCTCATGTCCTCCACTTTCTTAATTGCACTATGCCAAGCCATTGATCTCAGGCATTTGGAAGAGAACTTGAAGAACACAGTGAAGAACACTGTGAACCAAGTGGCCAAGAAGGTCCTAACAATGGGTGTCAATGGAGAATTACTCCCTTTAAGATTCTGCGAAAAGGATTTACTCACGGTCGTGGATTGCGAACACGTGTTCGCTTACATCGATGATCCTTGCAGCGCAACATACCCATTAATGCAGAAACTGAGACAAGTTCTGGTTGATCATGCCCTGCAAAATGTTGACAGAGAAAATGACTCAAACACTTCCGTTTTCTTAAAGATTGCAGCTTTTGAGGAAGAACTAAAGACCCATTTGCCCAAAGAAGTAGAAAGTGCAAGGATTGAGGTTGAAAATGGAAAATCTGTGATCCCTAACAGGATCAAAGAATGCAGATCTTATCCACTGTACAGATTTGTGAGAGAAGAACTTGGGACTGGGTTGCTAACTGGTGAGAAAGTAAGGTCACCTGGGGAAGAATTTGACAAGGTATTCGCTGCAATGTGTGAAGGAAAGTTGATTGATCCCTTATTGGAGTGCCTCAAGGAGTGGAATGGGGCTCCTCTGCCAATATGTTAG 2136 0.486 MEFSKVNGGNNGTFNLCNGDPLNWGMAAEALKGSHLDEVKRMVEEYRKPVVQIAGKSLRISQVAAIANHDAGVAVELSEEARAGVKASSDWVMESMNKGTDSYGVTTGFGATSHRRTKQGGALQNELIRFLNAGIFGNGTESSHILPHTATRAAMLVRINTLLQGYSGIRFEILEAMTKFLNHNITPCLPLRGTITASGDLVPLSYVAGLLIGRPNSKSMSPDGRVLSPEEAFQLAGIKGGFFELQPKEGLALVNGTAVGSALASIVLFEANILGILSEVLSAIFAEVMQGKPEFTDHLTHKLKHHPGQIEAAAIMEHILDGSSYVKAAQMLHEIDPLQKPKQDRYALRTSPQWLGPQIEVIRHATNMIEREINSVNDNPLIDVSRGKALHGGNFQGTPIGVSMDNTRLALASIGKLIFAQFSELVNDFYNNGLPSNLSASRHPSLDYGFKGAEIAMASYCSEIQFLANPVTNHVQSAEQHNQDVNSLGLISSRKTAEAVEILKLMSSTFLIALCQAIDLRHLEENLKNTVKNTVNQVAKKVLTMGVNGELLPLRFCEKDLLTVVDCEHVFAYIDDPCSATYPLMQKLRQVLVDHALQNVDRENDSNTSVFLKIAAFEEELKTHLPKEVESARIEVENGKSVIPNRIKECRSYPLYRFVREELGTGLLTGEKVRSPGEEFDKVFAAMCEGKLIDPLLECLKEWNGAPLPIC 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g3518 711 SUPERFAMILY L-aspartase-like 20 711 IPR008948 GO:0003824
Alju01g3518 711 FunFam Phenylalanine ammonia-lyase 524 645 - -
Alju01g3518 711 NCBIfam phenylalanine ammonia-lyase 20 701 IPR005922 GO:0005737|GO:0006559|GO:0016841
Alju01g3518 711 CDD PAL-HAL 56 521 IPR001106 -
Alju01g3518 711 Pfam Aromatic amino acid lyase 58 535 IPR001106 -
Alju01g3518 711 Gene3D - 524 645 IPR023144 -
Alju01g3518 711 Gene3D - 12 257 IPR024083 -
Alju01g3518 711 FunFam Phenylalanine ammonia-lyase 258 572 - -
Alju01g3518 711 FunFam Phenylalanine ammonia-lyase 12 257 - -
Alju01g3518 711 ProSitePatterns Phenylalanine and histidine ammonia-lyases signature. 193 209 IPR022313 GO:0016841
Alju01g3518 711 Gene3D Fumarase/aspartase (Central domain) 258 706 - -
Alju01g3518 711 PANTHER HISTIDINE AMMONIA-LYASE 18 711 IPR001106 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g3518 Alju-ChrAlju01 63932506 63937775 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g3518 1 711 Monolignol Biosynthesis Gene Families AT2G37040 78.897 0.0 1195