Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g3510 ATGAAAGGGCAAATGGAGGGTGGTGCGGTGATAATGCGTGAAAGGAAGGAAGAGAGGGACCCCACTAGCATTGAACAAGGAGCCTTCACCTACCATTGCCCCCTTCTTTTAAATCCTTTCTCCCTCCCCTCTCTCCTTTCAAAACCCCTCTCTCTCTCTCTTTGCTTCACCTTCTCCTTCACATCTCACTTCTCATTTGCAGGATTCACAATCCTTCAACCTCCTTTAACTAATACACTTCAAGTTTTCTCCGTGTCAAATTCGGACTTATACACACACAGACACACAACAGCGACCATGATCGGACCAAATTTCATGGATGAGATAGACTGTGGCAATTTCTTCGACCACATTGATGACCTCCTCGATTTCCCCGCTGAAGATGTGGACGCCGCCGCTTTGCCATCCACCGCCGTGAATTGCGACTCCTTCCCCACCGTCTGGCCCGGCGAGTCTGACTCCTTGCCTGGCTCTGACTCTGTTTTCTCCGGCAACAACACCTCCGACCTCTCCGCTGAGCTCTCAGTTCCGTATGAAGACATTGTCCAGTTGGAATGGCTTTCGAACTTTGTGGAGGACTCGTTCACTGGTGGAAGCCTCACCATGAAGAAAGTGGAGCAATCTTGCGTCACCAATATCAACGACTCAGCGCACAACCAATTCCAGACTTCAAGCCCGGTTTCTGTCCTCGAGAGCAGCAGCTCCTGCTCGGGGGAGAAGCCGGTGGCGGCGACACCTCGAAGCCCGCCGGAAATGGTTGTTCCCGTGCCTTGTGGTGGACGTGCACGCAGCAAGCGCCCGCGTCCCGCCACATTCAAGCCTCGTCCCGCGATGCAGCTCATTTCCCCTGCATCCTCTGTCGGTGAGAACACTACACAGCGAAATTCAGATTGTGAGAATTTCGTGGAGTCTCATCCGGTGATCAAGATACCGAAGCAATTTTCAGGGGAGCACAAGAAGAAGAAGAAGATCAAATTGACTTGTCCATTAGGTCCTGCTGATATGAATCAGCAGAATGCTTCATCACAGGCAGTGAGGAAATGTATGCATTGTGATATAACAAAGACACCACAATGGAGGGCAGGTCCAATGGGGCCAAAAACACTGTGCAATGCTTGTGGGGTTCGATACAAGTCCGGGAGGCTATACCCGGAATATAGACCCGCGGCTAGCCCTACGTTTTGCCCATCGTTGCACTCGAATTCCCATAAGAAGGTGCTTGAAATGAGAAGCAAAACACCACTTACCGATGCTTCACCTGAGCTCATTCCAAACACTAACAGCAGCCTTACCCTGGAATACATGTGA 1308 0.5099 MKGQMEGGAVIMRERKEERDPTSIEQGAFTYHCPLLLNPFSLPSLLSKPLSLSLCFTFSFTSHFSFAGFTILQPPLTNTLQVFSVSNSDLYTHRHTTATMIGPNFMDEIDCGNFFDHIDDLLDFPAEDVDAAALPSTAVNCDSFPTVWPGESDSLPGSDSVFSGNNTSDLSAELSVPYEDIVQLEWLSNFVEDSFTGGSLTMKKVEQSCVTNINDSAHNQFQTSSPVSVLESSSSCSGEKPVAATPRSPPEMVVPVPCGGRARSKRPRPATFKPRPAMQLISPASSVGENTTQRNSDCENFVESHPVIKIPKQFSGEHKKKKKIKLTCPLGPADMNQQNASSQAVRKCMHCDITKTPQWRAGPMGPKTLCNACGVRYKSGRLYPEYRPAASPTFCPSLHSNSHKKVLEMRSKTPLTDASPELIPNTNSSLTLEYM 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g3510 435 MobiDBLite consensus disorder prediction 412 435 - -
Alju01g3510 435 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 346 405 - -
Alju01g3510 435 ProSiteProfiles GATA-type zinc finger domain profile. 342 378 IPR000679 GO:0006355|GO:0043565
Alju01g3510 435 SMART GATA_3 342 392 IPR000679 GO:0006355|GO:0043565
Alju01g3510 435 CDD ZnF_GATA 347 394 IPR000679 GO:0006355|GO:0043565
Alju01g3510 435 PANTHER GATA TRANSCRIPTION FACTOR 106 414 - -
Alju01g3510 435 MobiDBLite consensus disorder prediction 232 273 - -
Alju01g3510 435 MobiDBLite consensus disorder prediction 418 435 - -
Alju01g3510 435 ProSitePatterns GATA-type zinc finger domain. 348 373 IPR000679 GO:0006355|GO:0043565
Alju01g3510 435 Gene3D - 342 392 IPR013088 GO:0006355|GO:0008270
Alju01g3510 435 FunFam GATA transcription factor 337 422 - -
Alju01g3510 435 Pfam GATA zinc finger 348 381 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g3510 Alju-ChrAlju01 63785102 63787083 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g3510 118 417 C2C2-Gata Transcription Factor Family AT4G32890 38.206 3.43e-44 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Alju01g3510 GATA 1.7e-14 CL0167
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g3510 01 63785102 63787083 Alju01g3510 01 63785102 63787083 ECH