Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g3482 ATGCCGCCTGAACCACTGCCGTGGGACCGGAAGGACTTCTTCAAGGAGAGGAAGCACGAGAGGTCTGAATCTCTGGGCTCTGTGGCGCGATGGAGAGACTCTTCTCATCATGGTTCCCGAGAGTTCAGTCGGTGGGGATCGGCCGATTTCCGCAGACCGCCAGGTCATGGTAAGCAGGGAAGTTGGCACCTGTTTTCCGAAGATTCTGGTCATGGATATGCACTATCTCGGTCCAGTGACAAGATACTGGAAGAAGATAACTGTCGCCCATCTGTTTCCCGAGGAGATGGAAAATATGGTAGAAACAGTAGGGAGAATAGAGGTTCCTTAAGCCAGAGAGATTGGAGGGGACATTCATGGGAGGCCACCAACGGCTCTCTTAATTTGTCCAGGAGGCCATCTGATGTGACTATTGACCAGAGGTCAGCTGATGACATGCTAACATATCCTTCTCATCCTCATTCTGATTTTGTAAATACTTGGGATCAGCATCATATGAAAGACCAGCACGATAAGAATGGTGGTGTCAATGGGTTGGGTACAGCACAGAGATTGGATAGAGAGCATTCTCTTGGTTCAAACATATGGAAGCCTCTTAAATGGGCCCGTTCTGGAAGCTTATCTTCACGAGGCTCAGGTTTTAGCCACACAAGTAGCTCGAGGAGTGGAGGGGTAGATTCCAATGAAGCAAAGTCTGAATTGCATCCAAAAAATGCAACTCCTATTGAATCCCATTCTGGGGATGGTGCTACATGTGCAACATCTTCTGCACCCTCTGAAGATCCAATATCCAGGAAGAAGCCTAGGTTGAATTGGGGTGAGGGACTTGCAAAGTATGAGAAGAAGAAAATTGAGGAACCTGATATAAGTGCAAGCAAGGATGACCCTGGCTTGTCTGCTAGTAATATTGAGCCCTCTAACTTTCTCGGTTCAAATTTACTAGATAAAAGCCCAAAAGTTACAGGCTTTTCAGATTGTGCATCCCCAGCCACTCCATCTTCTGTTGCCTGCAGTTCCTCGCCAGGTGTGGAGGATAAACTGTATGGAAAAGCTGTGAATAGTGACAATGATGTTAGTAATTTGAATGGCTTGCTCGAGCCTCAGAATCATCTACAGACGTTCTCGTTGAATTTAGAGAAGTTGGATATTGACTCCCTGAGTAGTTTGGGTTCTTCACTTGTTGGGTTGCTACAATCTGATGACTTAAGTTCTGTGGATCCTGGCATAGCAAGTTCTACTGCAATGAATAAGTTGCTGATATGGAAAGCTGACCTTTCTAAGGTACTGGAGGTTACTGAAGCTGAAATAGATTTACTTGAAAGTGAGCTGAAGTCACTGAAATCTGAATCTGGAAATAGCTGTCCGTGTCCTGCAGCATTGGGCTCCTCAATGGTGGCAAATAGTACAAAGTCTTGTAAAGAACGAGTTAGCGGCTATGATAAGGTTTTGCGGCCAGAGCCATTGCAGGTTTGTTCTTCTGCTGATCCTGATGCAGAGAAGATGTACCCTTCAACTAAAGCGCATATTATTCATGAAAATGGCAAGGAGGAAGATATTGATAGCCCTGGAACAGCAACCTCTAAATTTGTGGAGCCTCAGCCCCTTATTAAAGCAGTCTCTTCATTTAATATTGGGGGAAATGATAATTGCTGTGGAGGCTTTGATGCCATTCAATCTGCAAGCAGTAGATGCGTAGTGCCCTGTTCCACTAGTGAGCAAGCTATGGAGGTAAAAGATGGCATGGGTGCTGCTCCTGGTGCAATTGCTTTCTCTGGATCTGAGGACACATTGTGTAATAAAATTATTTCTTCTAATAAAGAACATTTTAGCAGAGTGGGTGAAGAATTTGCTCAGTTATTGCCTAAAGATTGTTGTCAGGTTGGTAATATGGGAGCTATCAATGACTCATACTCTTCAACTGCTGCTGTTAGAGAAAAATTTACCGAGAGAAAGTGGTTAGCAAGGATTAAGGAGCGTGTAATAACCCTTAAGTTTAAAGCCTTGCACCATCAATGGAAAGAAGATATGCGACTACTGTCTTTACGAAAATGTCGTCCGAAATCTCATAAGAAACTTGAAGTTGGCGTTCGGATCACTAATAATGGTTTTCAAAAGAATCGATCCTCCATTCGTTCTCGGATTTCCTACCCTGGAAATAATTTAAGCTTGGTTCCAACATCTGAGATAAATAATTTTGCCAGAAAACTTATCTCTGATCCCCAAGTTAAAGTTTACCGCAGCACTTTGAAGATGCCGGCATTAATTTTGGATGAGAAGGAGAAGATGATAACAAGGTTTCCATGTAGTAATGGGTTGGTTGAAGATCCTTTGGCGTATGAGAAAGAGAGGGCTATGATTAACCCTTGGACATCAGAAGAGAAAGATCTTTTCTTGGACAAATTTGCTGCTTTTGGGAAAGACTTCCAGAAAATTGCTTCTTTTCTTGGTCACAAGACAACTGCTGACTGTGTTGAGTTCTATTACAAAAATCATAAATCTGAGTGTTTTGAGAAAATTAAGAAGGACGTTAGGAAGACAGGGAAGTCGTATTTGACCAACACTGACTTGGTAGTATCAGGTAAAAAATGGAATCGAGATATAAATGCTGCTTCGCTCGAGATTTTGAGTGCCGCTTCCGTGATAGCAGGCCATGCAGACAGAATAAGTGTTAATAAAAAGTTGCGTTCAGGAAGTTCTCTTCTAGGGGGCTATGGTAGTATGAAGAGATCGAAGGGTGAGGATAGCATCCTAGAGAGATCAAACAGTTTTGATGCTCTTAGGGATGAAAGAGAGGCAGTTGCAGCTGATGTATTGGCTGGGATATGTGGTTCTATATCATCTGAGGCTATGAGTTCCTGCATAACAAGCTCTGTTGATCCTTTAGAGGGCAGCAGGGACAGGAGCCTGAAAACAAACCCTGGGAGAAAGCAATTGTTGACGCCTGATGCTACTCACAGTGTTGATGACGACACCTGTTCAGATGAGAGCTGTGAGGAGATGGATCCTACTGATTGGACTGATGAGGAGAGGTCAGCTTTTCTTCGAGCTGTATCATCATATGGGAAGGACTTTGCTAAGATCTCACGGTGTGTAGGTTCAAGGTCCCAAGATCAGTGTAAAGTGTTCTTCAGCAAGGCTAGGAAATGTCTTGGATTGGATCTCATGCGTCCCAAGTCTGTAAATTCTGGTTACCCAGTGAATGATGATGTGAATGGTGGTGGGAGTGATACAGATGATGCATGTGTTGTAGAGACAGGTTCGGCAATTGGCGCTGATAGGTCAGGCACTAGAACTGATGAGGATCAGCCATTGTCTGTCATGAATACATACTCTGATGAATTTAATCCCGTTGAACCCAGGGTCTTGTCAACTGATTTGAGTAAATCAAATAATATTGGAGCAGAAGTGGATCAAAATGGTGAAGATGTGGATGATATGGTTTCTGATGCTTGTGAAATGGATGATAAGCCTAAACTGGGCTATGTTGGTGGGGATGTCTTGTACAGTTCTGACCAGTCTGGTCCTGCCAGTGGCCAGACAGCTATGAACATGTTAGTTAGTGTAGAAGTGGGAGAAGATGAAGCAAATAAATTGGCAGGTGCAGTTACAGAATCAGTACCTTACCAGTCTAATTCTGTTGTTGAGGCTAAAGTGGTTTCTGAGGTTTCTTCTGGGGGTCTTGGAGAGGATTTGACAGGGCAGAAACAATCACTGCCTTCATGTCTTGATGATAGGGATAATAAACGTGAAGCAGTTGTTGTAGCTGAATCAAAAAGCTCAGTTCAAGACTCAAGTACAGTGGTCAAGGAGTTAACAGGGCGGAAACAATTACTGCCTCCATGTCTTGATGATAGGGGTAATAAACATGAAGCAGTTGCTGATGTAGGTGAATCAAAAAGTTCAGTTCAAGATTCAAGTACAATGGCAATGGCAATGGCAATGGCAAATGCTTTGCCTTTACCTGCTGGCGCTTCTTGTACAGGCTTGAATCTTGAAGATAAGCACGAATCTTCTCTTGGAGAGCCCTCTATATCAGCATTGCCTCTGGGGGATTTTCAGTCCTGCGGAAAATTATTGTTGCAAGATACTATTGCCATTCAAGGTGAGAAAAAAGTTATCCAAGATCATCTGCCTTCTGCACGTAATTTTCAAGGAAGTACAGATGTGCACTGTCAAAATTCCACAAGCAAAGATGGTCAACATGGTCACAGTCCCAGCCATTTATTGGACGGTGTTGAGGCTAATAGCGTCCTGCAGGGCTTTTCCTTACCTATTAAGCAAGAAGTGAAGGGTGATATTAGTTGCAGCAGTTCAGCATCTGAATTCCCGCTCATGTCCCAAAAGATTGAACAACCGTGTGACCATTACAAGTCAGAGTCGTGCACTTCAGTTGATTCCGAAGTGACATCCAGAAATGGTGATGTGAAGTTGTTTGGGAAGATATTAACCAATCCTTCATCCACTCAGAAATCTAATTTGAATTCCAAGGGACGTGAAGAAACTGGTACCCGCCACCCAAGGATGAGTAGCAAGTCTTCTACCCTGAAATTTAATGGCCATTGCCATCAAAATCCTGATGGAAATTCAACAATTTTGAAGTTTGATTGTGGTGATTACAATATAGGCCTTGAAAATGTTCCCATGACAAGTTATGGTTATTGGGATGGGAATAAGATACAGACTGGCATTCCTTCATTACCTGATTCTGCCATCTTGCTTGCGAAATATCCTGCTGCCTTCAGTAATTATGCTACATCCTCCCCTAAACTTGAGCAACAGTCATTACATGCATTTGCCAAGAGTAATGAACAGCACCTGAATGGCTCAGCGTTTACAACTCGAGAAATAAATAGCAGCAATGGTGTCATTGATTATCAAATGTTTAGGAGTAGGGATGCCCCGAAAGTGCAGCCATTTACGTTAGACATGAAAAACCGCCAAGAAGTATTTTCCGAGGTGCAAAGAAGAAATGGTTTTGAAGCTCTGGCAAATTTACAGCAGCAGGGGAGAGGAATGGTTGGAATGAATGGTAGCGTTGGGAGGCCAGGGATTCGGGTGGGAGGATCACACAGTGGTGTCTCAGATTTTGTGACAGCAATCAAAATGCATTATTCCAATTCTGACCAGTATGGTGGTCATAATGGAAGTATCATGAGAGAAGATGAATCATGGGGAGGAAAAAAAGGGGACTTGAGCAGGTAG 5202 0.4333 MPPEPLPWDRKDFFKERKHERSESLGSVARWRDSSHHGSREFSRWGSADFRRPPGHGKQGSWHLFSEDSGHGYALSRSSDKILEEDNCRPSVSRGDGKYGRNSRENRGSLSQRDWRGHSWEATNGSLNLSRRPSDVTIDQRSADDMLTYPSHPHSDFVNTWDQHHMKDQHDKNGGVNGLGTAQRLDREHSLGSNIWKPLKWARSGSLSSRGSGFSHTSSSRSGGVDSNEAKSELHPKNATPIESHSGDGATCATSSAPSEDPISRKKPRLNWGEGLAKYEKKKIEEPDISASKDDPGLSASNIEPSNFLGSNLLDKSPKVTGFSDCASPATPSSVACSSSPGVEDKLYGKAVNSDNDVSNLNGLLEPQNHLQTFSLNLEKLDIDSLSSLGSSLVGLLQSDDLSSVDPGIASSTAMNKLLIWKADLSKVLEVTEAEIDLLESELKSLKSESGNSCPCPAALGSSMVANSTKSCKERVSGYDKVLRPEPLQVCSSADPDAEKMYPSTKAHIIHENGKEEDIDSPGTATSKFVEPQPLIKAVSSFNIGGNDNCCGGFDAIQSASSRCVVPCSTSEQAMEVKDGMGAAPGAIAFSGSEDTLCNKIISSNKEHFSRVGEEFAQLLPKDCCQVGNMGAINDSYSSTAAVREKFTERKWLARIKERVITLKFKALHHQWKEDMRLLSLRKCRPKSHKKLEVGVRITNNGFQKNRSSIRSRISYPGNNLSLVPTSEINNFARKLISDPQVKVYRSTLKMPALILDEKEKMITRFPCSNGLVEDPLAYEKERAMINPWTSEEKDLFLDKFAAFGKDFQKIASFLGHKTTADCVEFYYKNHKSECFEKIKKDVRKTGKSYLTNTDLVVSGKKWNRDINAASLEILSAASVIAGHADRISVNKKLRSGSSLLGGYGSMKRSKGEDSILERSNSFDALRDEREAVAADVLAGICGSISSEAMSSCITSSVDPLEGSRDRSLKTNPGRKQLLTPDATHSVDDDTCSDESCEEMDPTDWTDEERSAFLRAVSSYGKDFAKISRCVGSRSQDQCKVFFSKARKCLGLDLMRPKSVNSGYPVNDDVNGGGSDTDDACVVETGSAIGADRSGTRTDEDQPLSVMNTYSDEFNPVEPRVLSTDLSKSNNIGAEVDQNGEDVDDMVSDACEMDDKPKLGYVGGDVLYSSDQSGPASGQTAMNMLVSVEVGEDEANKLAGAVTESVPYQSNSVVEAKVVSEVSSGGLGEDLTGQKQSLPSCLDDRDNKREAVVVAESKSSVQDSSTVVKELTGRKQLLPPCLDDRGNKHEAVADVGESKSSVQDSSTMAMAMAMANALPLPAGASCTGLNLEDKHESSLGEPSISALPLGDFQSCGKLLLQDTIAIQGEKKVIQDHLPSARNFQGSTDVHCQNSTSKDGQHGHSPSHLLDGVEANSVLQGFSLPIKQEVKGDISCSSSASEFPLMSQKIEQPCDHYKSESCTSVDSEVTSRNGDVKLFGKILTNPSSTQKSNLNSKGREETGTRHPRMSSKSSTLKFNGHCHQNPDGNSTILKFDCGDYNIGLENVPMTSYGYWDGNKIQTGIPSLPDSAILLAKYPAAFSNYATSSPKLEQQSLHAFAKSNEQHLNGSAFTTREINSSNGVIDYQMFRSRDAPKVQPFTLDMKNRQEVFSEVQRRNGFEALANLQQQGRGMVGMNGSVGRPGIRVGGSHSGVSDFVTAIKMHYSNSDQYGGHNGSIMREDESWGGKKGDLSR 1733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g3482 1733 SMART sant 1001 1049 IPR001005 -
Alju01g3482 1733 SMART sant 785 833 IPR001005 -
Alju01g3482 1733 Coils Coil 422 449 - -
Alju01g3482 1733 Gene3D - 954 1058 - -
Alju01g3482 1733 Pfam Myb-like DNA-binding domain 1004 1044 IPR001005 -
Alju01g3482 1733 Pfam Myb-like DNA-binding domain 788 829 IPR001005 -
Alju01g3482 1733 MobiDBLite consensus disorder prediction 33 47 - -
Alju01g3482 1733 Gene3D - 765 837 - -
Alju01g3482 1733 ProSiteProfiles SANT domain profile. 784 835 IPR017884 -
Alju01g3482 1733 MobiDBLite consensus disorder prediction 207 269 - -
Alju01g3482 1733 MobiDBLite consensus disorder prediction 1383 1402 - -
Alju01g3482 1733 SUPERFAMILY Homeodomain-like 1002 1051 IPR009057 -
Alju01g3482 1733 CDD SANT 1005 1043 IPR001005 -
Alju01g3482 1733 MobiDBLite consensus disorder prediction 957 1004 - -
Alju01g3482 1733 ProSiteProfiles SANT domain profile. 1003 1051 IPR017884 -
Alju01g3482 1733 MobiDBLite consensus disorder prediction 1710 1733 - -
Alju01g3482 1733 MobiDBLite consensus disorder prediction 1383 1408 - -
Alju01g3482 1733 MobiDBLite consensus disorder prediction 244 261 - -
Alju01g3482 1733 MobiDBLite consensus disorder prediction 17 117 - -
Alju01g3482 1733 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1005 1054 IPR017930 -
Alju01g3482 1733 MobiDBLite consensus disorder prediction 1484 1519 - -
Alju01g3482 1733 MobiDBLite consensus disorder prediction 78 114 - -
Alju01g3482 1733 MobiDBLite consensus disorder prediction 207 227 - -
Alju01g3482 1733 ProSiteProfiles Myb-like domain profile. 997 1047 IPR001005 -
Alju01g3482 1733 MobiDBLite consensus disorder prediction 1224 1244 - -
Alju01g3482 1733 PANTHER DUPLICATED HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 1729 - -
Alju01g3482 1733 SUPERFAMILY Homeodomain-like 772 833 IPR009057 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Alju01g3482 Myb_DNA-binding 1.9e-08 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g3482 01 63330534 63337728 Alju01g3482 01 63330534 63337728 ECH