Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g3459 ATGATAATGGAAATGGACTACAAAATCAAGACCACTTCACCATCTTCCTCCTCCTCTCCTCCTCCGCCAGCGCCATCACAACCACAATCGCCGCCGTCGCCGGTGGTGGTTTCGCCTTGCGCCGCCTGCAAGATCCTCCGCCGTCGCTGCGTCGAGAAGTGTGTTCTGGCGCCGTATTTCCCGCCGACCGATCCGCTCAAGTTCACCATAGCTCACAGAGTCTTCGGAGCCAGCAACATCATCAAGTTCTTGCAGGAACTTCCAGAATCACAGAGAGCGGATGCAGTGAGCAGCATGGTGTACGAAGCAAATGCAAGGATAAGGGACCCAGTGTACGGGTGTGCCGGAGCCATATGTCAGCTTCAGAAGCAAGTGAGCGAGCTGCAAGGTCAGCTAGCCAAGGCTCAAGCCGAGCTGGTCAACATGCAGTGTCAGCAAGCCAATTTGGTGGCTCTCATTTGCATGGAAATGAGCCAATGTCACCACCCATTATCTTCAGAGCCCCATCACTCCATGATAGCTGCAGCTCAGTCGTCGGCTCAGCCGCCACTGCATGAAGACATGAGCTGCTTGTTTGATGATAACAACAACATCAACAACTTCAGCTCGGCTTGGGGGGCTTGGGAGCCTCTTTGGACATGA 642 0.5421 MIMEMDYKIKTTSPSSSSSPPPPAPSQPQSPPSPVVVSPCAACKILRRRCVEKCVLAPYFPPTDPLKFTIAHRVFGASNIIKFLQELPESQRADAVSSMVYEANARIRDPVYGCAGAICQLQKQVSELQGQLAKAQAELVNMQCQQANLVALICMEMSQCHHPLSSEPHHSMIAAAQSSAQPPLHEDMSCLFDDNNNINNFSSAWGAWEPLWT 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g3459 213 MobiDBLite consensus disorder prediction 1 34 - -
Alju01g3459 213 Pfam Lateral organ boundaries (LOB) domain 39 136 IPR004883 -
Alju01g3459 213 ProSiteProfiles LOB domain profile. 38 139 IPR004883 -
Alju01g3459 213 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 38 172 - -
Alju01g3459 213 MobiDBLite consensus disorder prediction 16 34 - -
Alju01g3459 213 Coils Coil 118 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g3459 Alju-ChrAlju01 63035117 63036630 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g3459 35 213 AS2 family AT1G07900 63.736 1.36e-73 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Alju01g3459 LOB 4.7e-41 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g3459 01 63035117 63036630 Alju01g3459 01 63035117 63036630 ECH