Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g3442 ATGCCAACACCACCACCAACCGCACCGTTTGGTGCTCCTCAAGAAACCCCCAATGCACGCTCCTCTACTCCTCCTTTATTATCTTCCTCTTATCCAATCACTCTCAAGTTCGTGGACGTGGGATACAGAGCAAAGGTGGATAGAAATAAAGGAGGGAGCAACATAAAGCGAATGATCTCGTCGATGTCGGTCGACGGGGGAGCCACCGCGGCGGCGGCGCAAGAGAAAATCATTCTGAACGGCGTGACGGGGATGGTGTCTCCGGGAGAAATCCTGGCTGTACTGGGCCCGTCGGGGAGCGGGAAATCGACGCTCCTAAACGCACTCGCCGGGAGACTCGGCCAAGGCCAGGGACTCACCGGAACAATCCTCGCAAACGGATGCAAACTCAGCAAACCGGTTCTCCGGCGAACGGGGTTCGTGACCCAAGACGACGTGTTATACCCTCACCTCACCGTCCGAGAGACTCTGATCTTCTGCTCACTTCTCCGGCTTCCGAGAACGCTCTCAAAAGCCGAGAAGATATCGGTCTGCGACTCGGTGATCGCCGAACTGGGACTAGTGAAATGCGAAAACACGATCATCGGAAACGCGTATATAAGAGGTGTATCCGGAGGGGAAAGGAAGAGGGTGAGTATAGGGCATGAGATGTTGATGAATCCGAGCTTGTTGATACTGGACGAGCCGACGTCGGGGTTGGACTCGACGGCGGCGCACAGGCTGATGATGACTCTGACGACGGTGGTGGCGCAGCAAAAAGGGAAGACGGTGGTGGCGTCGATACACCAACCGTCAAGCAGGGTGTTTCAGATGTTTGATAAGATTTTGGTGTTATCGGAGGGACAGTGTTTGTATTTTGGGAAAGGAAGTGAAGCTATAAGCTATTTTGAAACTCTTGGATTTAACCCGTCTTTTCCCATGAACCCCGCCGACTTTCTGCTTGATCTCGCTAACGGTGTTTGGCATCAGGCTGATAGTAGTGTAAGTGAAAGAGACAGGCCAAATAATATAAAGCAAACCCTAGTCCACTCTTACAACACCATTCTAGCTCCCAAAGTCAAAGAAGCAATATTGAACAACACAGACACTTCAACAAAACACACTCTTCATCATCAACAACAACAACAAACCCTAGAAATCACCAATCCAAAAGATGGAAGAAGTTATGGTAAGTTCAAGAACATTAACATTACAATCTCCCTCTCTAATTGGTTCAACCAGTTCAGTGTCCTCCTCCGGAGAAGCCTCAAAGAACGAAAGCACGAATCCTTCAACCCGCTCCGAGTCTTGCAGGTGGTGGCGGCCGCCCTCCTTGCCGGCCTCATGTGGTGGCATTCCGATTACCGGGACGTCCAAGACCGCCTCGGCCTCCTCTTCTTCATCTCCATTTTCTGGGGTGTGTTTCCTTCCTTCAACTCCGTCTTCGCCTTCCCACAAGACCGCGCCCTCTTCATCAAGGAGCGAGCCTCTGGCATGTACACTCTCTCGCCTTACTTCACCGCCCGTATCGTCGGCGACCTCCCCATGGAGCTCCTCCTCCCCTTCATCTTCCTCACCGTCACCTACTGGATGAGCGGCCTCCGGCCAGACCTATGGTCTTTCCTACTAACCCTACTCGTTGTCCTCTTCTACGTCCTCGTCTCTCAGGGGCTCGGCCTTTTCCTGGGCGCCGCCATAATGGACCCCAAGCAGGCCTCCACGGTGGCCGCCGTGGTGATGCTAGGGTTCGTGTTGATCGGCGGGTATTACGTGCACAAGGTTCCTTCATGCATGGGGTGGCTCAAGTATGTGTCCATTACTTTTTATTGTTACAGGCTTTTGATTTATATTCAGTATGGTGATGGGAAGAGAATCGCAGAGTTTCTGGGTTGTGTTAACAATGGAGGGATTATTATTAATGACAGAGGACACTGTAAGTTTGTGGAACAAGACTTGGTGGGTCAGATAAGCCCTTGGGTTTGTTTTGGGGCTTTGGTTTTTATGTTTGTGGGTTACAGAATGTTGGCTTATTTAGCATTGAGGAAGATCAAGACTTGA 2037 0.513 MPTPPPTAPFGAPQETPNARSSTPPLLSSSYPITLKFVDVGYRAKVDRNKGGSNIKRMISSMSVDGGATAAAAQEKIILNGVTGMVSPGEILAVLGPSGSGKSTLLNALAGRLGQGQGLTGTILANGCKLSKPVLRRTGFVTQDDVLYPHLTVRETLIFCSLLRLPRTLSKAEKISVCDSVIAELGLVKCENTIIGNAYIRGVSGGERKRVSIGHEMLMNPSLLILDEPTSGLDSTAAHRLMMTLTTVVAQQKGKTVVASIHQPSSRVFQMFDKILVLSEGQCLYFGKGSEAISYFETLGFNPSFPMNPADFLLDLANGVWHQADSSVSERDRPNNIKQTLVHSYNTILAPKVKEAILNNTDTSTKHTLHHQQQQQTLEITNPKDGRSYGKFKNINITISLSNWFNQFSVLLRRSLKERKHESFNPLRVLQVVAAALLAGLMWWHSDYRDVQDRLGLLFFISIFWGVFPSFNSVFAFPQDRALFIKERASGMYTLSPYFTARIVGDLPMELLLPFIFLTVTYWMSGLRPDLWSFLLTLLVVLFYVLVSQGLGLFLGAAIMDPKQASTVAAVVMLGFVLIGGYYVHKVPSCMGWLKYVSITFYCYRLLIYIQYGDGKRIAEFLGCVNNGGIIINDRGHCKFVEQDLVGQISPWVCFGALVFMFVGYRMLAYLALRKIKT 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g3442 678 Pfam ABC transporter 79 231 IPR003439 GO:0005524
Alju01g3442 678 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 35 305 IPR003439 GO:0005524
Alju01g3442 678 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 74 299 IPR027417 -
Alju01g3442 678 Gene3D - 67 299 IPR027417 -
Alju01g3442 678 MobiDBLite consensus disorder prediction 1 27 - -
Alju01g3442 678 Pfam ABC-2 type transporter 407 612 IPR013525 GO:0016020|GO:0140359
Alju01g3442 678 SMART AAA_5 88 282 IPR003593 GO:0016887
Alju01g3442 678 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 23 670 - -
Alju01g3442 678 FunFam ABC transporter G family member 22 67 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g3442 Alju-ChrAlju01 62784587 62792904 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g3442 78 319 Calmodulin-binding Proteins AT2G36910 27.236 1.30e-12 69.7