Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g3427 ATGGCAACAGCAACATATCCGCCGCCGCCCCCCTATTACAGACTGTACAAAGATTATTTACAAGACCCTAAATCAGCTCCAGAACCTCCCCCTCCTATAGAAGGGACCTATGTTTGTTTTGGAGGCACTTACACTACTGATGACACTCTGCCAAGTTTGGAAGAGCAGGGAGTGCGCCAACTCTATCCTAAGGGCCCTGATGTTGATTATAAGAAGGAGCTGAGATCACTTAACGGAGACTTGCAGCTTCACATTTTGGAGCTTGCCGATATTCTCATTGAGAGACCATCACAATATGCGAGGAGAGTAGAAGAAATATCTCTCGTATTCAAGAACTTGCATCACCTTCTAAACTCACTGCGCCCCCATCAGGCAAGAGCAACATTGATTCACATTTTAGAACTTCAAATACAGCGTCGTAAACAAGCAGTGGAGGACATTAAGAGGAGGAGAGAGGAAGCACGGAGACTTCTTAATGAGGCCCTGGCAACAGTAGATGGCAATTAG 507 0.4596 MATATYPPPPPYYRLYKDYLQDPKSAPEPPPPIEGTYVCFGGTYTTDDTLPSLEEQGVRQLYPKGPDVDYKKELRSLNGDLQLHILELADILIERPSQYARRVEEISLVFKNLHHLLNSLRPHQARATLIHILELQIQRRKQAVEDIKRRREEARRLLNEALATVDGN 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g3427 168 Coils Coil 130 164 - -
Alju01g3427 168 Pfam MED7 protein 4 158 IPR009244 GO:0003712|GO:0006357|GO:0016592
Alju01g3427 168 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 7 2 167 IPR009244 GO:0003712|GO:0006357|GO:0016592
Alju01g3427 168 Gene3D - 63 159 IPR044888 -
Alju01g3427 168 SUPERFAMILY Mediator hinge subcomplex-like 67 159 IPR037212 GO:0016592
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g3427 Alju-ChrAlju01 62646742 62649170 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR MED7 Alju01g3427 Med7 1.2e-42 No_clan