Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g3425 ATGCTTTCTAATTCGTGTTTGCAGGAGAGATCTTCAATGGGGGATATGGAATCATGTGTGCCACCAGGATTTAGATTCCATCCAACAGAGGAAGAACTTGTAGGATATTACCTCAAGAGGAAGATTAACTCACTCAAAATCAACCTAGATGTCATTGTTGAGCTAGATCTCTACAAAATTGAACCATGGGACATACAAGATAGATGCAAGCTAGGATATGAGGAGCAGAAGGAGTGGTATTTTTTCAGCCACAAGGACAAGAAGTATCCAACGGGGACAAGGACGAATAGGGCGACGGCAGTGGGGTTCTGGAAAGCGACGGGGAGGGACAAGGCAGTGATGTCGAAGAACAAGATCATAGGAATGAGGAAGACTCTTGTGTTCTACCAAGGACGTGCCCCTAATGGCAGGAAATCTGACTGGATCATGCATGAATATCGCCTCCAATCTTCTGAACATGCCCCTCCTCAGGAAGAAGGATGGGTTGTGTGTAGAGCATTCAAAAAGCCAAGTCCAAGTCATATGAGGCCAGGTTTTGAAGCAGCACAGTGCTATTTCAGAGACCAAGAGATCAACAGCCATGGAAGGCCCTTGATCTCTTCATTTTCTGAGATTCTGAATCAAACCCATCATTTTCTGATGAATAACAATACCTCTCATCATCATCATCAACCTTTGATCAATTTGGATCACCAGAACCAACAACTTGTTGATCTTCCTCAACTAGATAGCCCTACTCTGGGAATAAGATCATCATCAGATAATAATAATTATGGCCAAACCAATATTAATAATAATATTGGGGAAGAATATTACAGTGATGACGTGGAAAGCTTGGACCATTTGTTTGCTTCAAATCTCACAGATACATCAACTTCTGGTTCTGCTAATTTCTTTGCACACACCAACTTTCCCATGAACATGATACCTCATAACAGTGAAGCAAGCCAAGCCCTAGGATTATGCTTTCCTGATTCTTCATAG 984 0.4217 MLSNSCLQERSSMGDMESCVPPGFRFHPTEEELVGYYLKRKINSLKINLDVIVELDLYKIEPWDIQDRCKLGYEEQKEWYFFSHKDKKYPTGTRTNRATAVGFWKATGRDKAVMSKNKIIGMRKTLVFYQGRAPNGRKSDWIMHEYRLQSSEHAPPQEEGWVVCRAFKKPSPSHMRPGFEAAQCYFRDQEINSHGRPLISSFSEILNQTHHFLMNNNTSHHHHQPLINLDHQNQQLVDLPQLDSPTLGIRSSSDNNNYGQTNINNNIGEEYYSDDVESLDHLFASNLTDTSTSGSANFFAHTNFPMNMIPHNSEASQALGLCFPDSS 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g3425 327 Gene3D NAC domain 29 172 IPR036093 GO:0003677|GO:0006355
Alju01g3425 327 FunFam NAC domain-containing protein 29 173 - -
Alju01g3425 327 SUPERFAMILY NAC domain 9 169 IPR036093 GO:0003677|GO:0006355
Alju01g3425 327 ProSiteProfiles NAC domain profile. 20 169 IPR003441 GO:0003677|GO:0006355
Alju01g3425 327 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 17 250 - -
Alju01g3425 327 Pfam No apical meristem (NAM) protein 21 148 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g3425 Alju-ChrAlju01 62586845 62589849 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g3425 16 247 NAC Transcription Factor Family AT1G71930 64.876 1.81e-108 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Alju01g3425 NAM 1.2e-36 No_clan