Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g3415 ATGGAAGATCCAGAGGAAGAAGAGCTTCTGAATCTCAGCCTCTCAGTTTCTGCAGGCAGATCATCAGAAAGAAAAAAGAAAGGCAAGATGATGATGAATCATCATCACCACCACCACCACCATCTTCTTCACCAGTACGAACAAGCAGGCTTCGAAGGCAAGATCTTCAGGCTTCTCCAAACCAGAGAGCAAATGCTTCGTTCAGATCACAACCTCATGATGATGATGAGAAATAATCGAACTCGAGGTGGTGGAGGTGGTTTAGATCAGGATGGTAGTGATAATAATGATAATAATAATAACGGTCTCCCTCTGATTCATCTTCTTCTCAGTACGGCCACTTGCGTGGACGATACCGACTTCAACACTGCCCTAGATAACCTCACTCAGCTTTACCAAACCGTCTCCCTTACCGGCGATTCCGTCCAACGAGTGGTTGCTTGCTTCGCCGACGGCCTCGCCGCCCATCTCATCACCAGAAAATCCCCCTTCTACGACATGCTCATGGAAGAACCGACGAGTGAGGAAGAGTTCTTAGCCTTCACTGACCTTTATAGAGTGTCGCCTTACTACCAATTCGCCCACTTCACGGCGAACCAAGCCATCCTCGAGGCGTTCGAGAATGAGGAAGACAAGAACAACAAAGCATTACACGTCATCGACTTCGATGTCTCTTATGGTTTTCAATGGCCCTCACTCATCCAATCTCTCTCGGAGAAGGCCACCGCCGGGAACAGAATATCCCTCCGAATCACCGGTTTCGGGAAGAATCTCAAAGAGCTTCAAGAAACAGAATCTCGCCTGGTCAGCTTCTCCAAGGGATTCACCAATTTAGTGTTTGAATTCCAAGGCCTGCTTCGAGGATCGCGAGTGATTAACCTGAGGAAGAAGAAGAATGAAACAGTGTGTGTTAATTTGGTGTCATACTTGAACACATTGAGTAGTTTCATGAAGATTTCTGACACATTGGGATTTGTTCATTCTCTTAATCCCTCCATTGTTGTTCTTGTGGAGCAAGAAGGAAGTCGAAGCCCGAGAACGTTCTTGTCCAGATTCACCGATTCGTTGCATTATTTCGCCGCCATGTTTGATTCTCTTGATGATTGCTTGCCCATGGAAAGTGCAGAGAGGTTGAGGATTGAGAAGAAGCTTCTAGGGAAAGAGATTAAGGCTATGTTGAATTACTATGACGTGGACGGTGTGGATTGTCCCAAGTATGAGAGGATGGAGACATGGAAGGCTAGGATGGAGAGCCATAGGTTTAGTGGAACCAAAGTGAGTTCGAAGGCTTTGATTCAGGCCAAGTTGCTTTTGAAGATGAGGACTCATTATTCGCCGCTTCAGTTTGAAGATGATGGAGGAGGCTGCGGCGGTTTCAGGGTTTCGGAGAGAGACGAAGGAAGAGCGATTTCTTTGGGATGGCAAAATAGGTTTCTTCTTACAGTCTCGGCATGGCAGACAGAAGTGTGA 1470 0.4673 MEDPEEEELLNLSLSVSAGRSSERKKKGKMMMNHHHHHHHHLLHQYEQAGFEGKIFRLLQTREQMLRSDHNLMMMMRNNRTRGGGGGLDQDGSDNNDNNNNGLPLIHLLLSTATCVDDTDFNTALDNLTQLYQTVSLTGDSVQRVVACFADGLAAHLITRKSPFYDMLMEEPTSEEEFLAFTDLYRVSPYYQFAHFTANQAILEAFENEEDKNNKALHVIDFDVSYGFQWPSLIQSLSEKATAGNRISLRITGFGKNLKELQETESRLVSFSKGFTNLVFEFQGLLRGSRVINLRKKKNETVCVNLVSYLNTLSSFMKISDTLGFVHSLNPSIVVLVEQEGSRSPRTFLSRFTDSLHYFAAMFDSLDDCLPMESAERLRIEKKLLGKEIKAMLNYYDVDGVDCPKYERMETWKARMESHRFSGTKVSSKALIQAKLLLKMRTHYSPLQFEDDGGGCGGFRVSERDEGRAISLGWQNRFLLTVSAWQTEV 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g3415 489 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 88 481 IPR005202 -
Alju01g3415 489 Pfam GRAS domain family 105 486 IPR005202 -
Alju01g3415 489 MobiDBLite consensus disorder prediction 15 37 - -
Alju01g3415 489 MobiDBLite consensus disorder prediction 79 99 - -
Alju01g3415 489 ProSiteProfiles GRAS family profile. 96 486 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g3415 Alju-ChrAlju01 62471556 62473025 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g3415 97 486 GRAS Transcription Factor Family AT1G14920 33.251 4.48e-51 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Alju01g3415 GRAS 7.6e-88 CL0063