Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g3406 ATGGCTGCTTCAACTTCTTCCTCTTCTTTTTCTCACAAACCCTGGAATCCCTCCTCTGATTCACCCCCACCAATTTCTCTCACCGCCGATCAGCTCAAACTCTGTAATGAAGCGCTTGCCAGCTTTAGGGCGAGAACACCGGAGATGATCGATCAAGAGTTCGCACACTTGGAGGCCAATGTGATAACACTAGGTGAGCTGCGGAGAAGATGCACTGTAGCTCTAAATGACGTAAATCTGCACAAAAATCGGTATCCGGAATTTGTCCTGCCATTTGACGATACCAGGGTTGTTCTGGAATCAAGTTCAGATCTTAGACCTACGGCCATGGGATATATCAATGCAAGCTTTCTCTCGATCTCTTCCTCTGAGAGTGTTTCTAAGTTTATAGCTACACAAGGTCCACTGCCACATACTTGTGAGGATTTCTGGGAAATGGTAATCCAATACCGTTGCCCCGTCATTGTGAATCTCACTGCGCTCGTTGAACACAACAAGATTGTAAAGTGTGACGATTATTTTCAAGCTGAGGGTGGACCTATGAAGTTTGGTAACATCTCTGTTGTTTGTGAATGGATGAAAACTGTTGAAAACTCATTGGTACTGCGCCATTTGAAGGTGTATAGAAAGGAAGATCCTCCCTTGTCTGTTTTGCACATTCATTATCCTGAGTGGCCTGATTATGGAGTTCCCAACGATACACTTGCTGTGCGTGCAATTTTTAAGAGATTGTACCATTTACCACCAAAACTTGGCCCAATAGTGGTGCATTGCAGTGCAGGTATTGGAAGAACTGGAGCATACTGTGCTGTTCACAATACAATTCAGAGAATCCTTGTTGGTGATAAGTCTGCCTTGGATCTTTGCAATACCATATTTTTCTTCAGGTCGCAGCGATATGGAATGGCTCAGAAACAGAGCCAGTACAATTTGTGCTATGAAGCTATAGTAGAGGCTCTAGATGAACTTGTTTCTAATCATCATCAGCAATGA 993 0.4371 MAASTSSSSFSHKPWNPSSDSPPPISLTADQLKLCNEALASFRARTPEMIDQEFAHLEANVITLGELRRRCTVALNDVNLHKNRYPEFVLPFDDTRVVLESSSDLRPTAMGYINASFLSISSSESVSKFIATQGPLPHTCEDFWEMVIQYRCPVIVNLTALVEHNKIVKCDDYFQAEGGPMKFGNISVVCEWMKTVENSLVLRHLKVYRKEDPPLSVLHIHYPEWPDYGVPNDTLAVRAIFKRLYHLPPKLGPIVVHCSAGIGRTGAYCAVHNTIQRILVGDKSALDLCNTIFFFRSQRYGMAQKQSQYNLCYEAIVEALDELVSNHHQQ 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g3406 330 Gene3D Protein tyrosine phosphatase superfamily 25 328 IPR029021 -
Alju01g3406 330 PANTHER RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE 43 321 - -
Alju01g3406 330 Pfam Protein-tyrosine phosphatase 79 318 IPR000242 GO:0004725|GO:0006470
Alju01g3406 330 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 33 321 IPR029021 -
Alju01g3406 330 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 252 310 IPR000387 GO:0016311|GO:0016791
Alju01g3406 330 ProSiteProfiles PTP type protein phosphatase domain profile. 50 319 IPR000242 GO:0004725|GO:0006470
Alju01g3406 330 FunFam Tyrosine-protein phosphatase non-receptor type 12 29 327 - -
Alju01g3406 330 SMART PTPc_3 49 321 IPR000242 GO:0004725|GO:0006470
Alju01g3406 330 MobiDBLite consensus disorder prediction 1 27 - -
Alju01g3406 330 PRINTS Protein tyrosine phosphatase signature 111 118 IPR000242 GO:0004725|GO:0006470
Alju01g3406 330 PRINTS Protein tyrosine phosphatase signature 286 301 IPR000242 GO:0004725|GO:0006470
Alju01g3406 330 PRINTS Protein tyrosine phosphatase signature 129 149 IPR000242 GO:0004725|GO:0006470
Alju01g3406 330 PRINTS Protein tyrosine phosphatase signature 253 271 IPR000242 GO:0004725|GO:0006470
Alju01g3406 330 PRINTS Protein tyrosine phosphatase signature 215 232 IPR000242 GO:0004725|GO:0006470
Alju01g3406 330 PRINTS Protein tyrosine phosphatase signature 302 312 IPR000242 GO:0004725|GO:0006470
Alju01g3406 330 ProSitePatterns Tyrosine specific protein phosphatases active site. 256 266 IPR016130 GO:0016311|GO:0016791
Alju01g3406 330 MobiDBLite consensus disorder prediction 1 26 - -
Alju01g3406 330 SMART ptp_7 216 318 IPR003595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g3406 Alju-ChrAlju01 62221584 62227325 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g3406 30 325 Protein tyrosine phosphatase (PTP) family AT1G71860 59.667 8.17e-130 372
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g3406 01 62221584 62227325 Alju01g3406 01 62221584 62227325 ECH