Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g3400 ATGTATGAACAATCGGATTGGGTCCATTTCAAAATGGGTCTCGGATTCATCCGAATTTTAACACTCTCCGCCATCTTCTTCACCGCCATCGCCTCCTCCGCCGCCGCCATCTCTCCTGGCTCGACTCTCTTAGCTTCCAACACAAATCAAAGATGGTCTTCTCCGAACGACACATTCTCTCTCCATTTCGTTCCTTCCAACCCCCAAACTGAACCTCCTACCTTCATAGCCGCCATCGTCTACTCCGGCGACGTCCCGGTCATCTGGTCCGCCGGTAATGGCTCGGCCGTGGACTCCGGCGGCTCCTTCCAGTTCCTTTCCAGCGGAACCCTTCGCCTCCTAAACGGGTCCGGGTCAATCGTTTGGGACTCCAGAACTTCAAATCTGGGTGTCTCCTCCGCCACCCTACAAGGCGACGGCAACCTCGTGCTCTCAAACGGAACAGCCACCGTCTGGTCAACCTTCGACAATCCAACTGATACAATTGTTCCGTCTCAGAACTTCACTACCGGTATGGTTTTGCGATCTGGATTGTACTCGTTTAGTCTTATTTCAAGTGGAAATTTGACTCTTAAATGGAATGATAGTGTAGAATACTGGAATCAGGGTTTGAATGCGTCTGTGAATGCAAAGTTAAATTCACCGGTTTTGATGTTGCAATCAATAGGGCTTCTGCAACTCTATGATTCTAATCTGTCAGCTCCAGCTGTTATTGCTTACAGTAGTGATTACGCTGAAGGTAGTGATGTACTGAGAATTTTGAAGATAGATAGTGATGGGAACCTGAGGATTTACAGTTCTTTAAGAAATAGTGGAACTGTAACTGCAAGATGGGCTGCTGTAGATCAATGTGAGGTTTTTGGTTACTGTGGGAACTATGGCATTTGCAGTTATAATGATACAGACCCAATCTGTGGGTGCCCGTCTCAGAATTTTGAGATGATTGATCCGAGTAATAGCCGAAAAGGATGTAGAAGGAATTTGAACCTTGATGATTGTCCTGGAAGTGCAACTATGTTGCAATTGGAGCATACTCAGTTCTTGACTTATCCACCTGAGCTGAGTGCAGAAATATTTTTCATTGGTATATCAGCTTGTAGAGGTAATTGTCTTGCAGGTAACTGCTTTGCTTCTACTTCGTTATCAGATGGCACAGGACAGTGTTACATAAAAACGTCAAATTTTATCAGCGGCTATCAAAATCCTGCGCTTCCTAGCACTTCATATGTCAAGGTTTGTGGACCAGTGGCTCCAAATCCTCCATCTTCCTTGGCTGGAGCTGAGAAGAAGCATCGTGGGAGGGTACCGGCTTGGATTGTGGTGTTAGTGGTTTTGGGTACCCTTTTAGCTTTGATTGCCTTTGAAGGTGGTTTATGGTTCTGGTGTTGTAGGAACAGAACAATACTAGGAGGATTATCTGCACAATATGCTCTTCTTGAGTATGCTTCTGGTGCACCGGTCCAGTTCTCGTACAAGGATCTCCAGCGGGCAACAAAAGGGTTTAAAGAGAAGCTCGGGGCTGGGGGATTTGGTGCCGTGTATAGAGGAGTCCTTGCTAATAAAACTGTTGTTGCAGTGAAGCAACTTGAGGGCATTGAGCAAGGTGAGAAACAGTTTAGGATGGAAGTAGCTACTATAAGCAGCACCCATCATCTCAATCTGGTGAGGCTCATCGGTTTCTGCTCAGAAGGGCGCCACAGGCTTTTAGTGTACGAGTTCATGAAAAACAGTTCGCTTGATAATCTTCTGTTTGTGACTGAAGAACAGTCAGGAAAATTGTTGAATTGGGAGTACCGGTTCAACATTGCCCTCGGCACTGCAAGGGGAATCACGTATCTTCATGAGGAGTGTCGAGACTGCATTGTCCATTGTGATATAAAACCTGAAAACATTCTCTTGAACGAGAATTACATTGCTAAGGTATCAGATTTCGGCCTTGCGAAGCTTATAAATCCAAAAGACCACAGGCACCGAACTCTGACGAGCGTGAGAGGGACACGAGGATATCTAGCTCCCGAATGGCTTGCCAATCTTCCCATAACTTCCAAATCTGACATATACAGCTATGGTATGGTTTTGCTGGAAATTGTGAGTGGAAGGAGAAACTTTGAACTGTTAGATGACAGAAACAGGAAAAAGTTCTCTGACTGGGCTTATCAAGAGTTTGAGAAAGGCAATATCATGGGAATACTTGACAAAAGACTGAATGACCAAGAAGTTGATATGGAGCAAGTACAAAGGGCAATTCAAGTAAGCTTCTGGTGCATACAGGAGCATCCATCTCACAGGCCAATAATGAGTCGGGTCGTGCAAATGCTTGAAGGGATAACCGAGATCGAGAAGCCGCCAGCACCTAAATCCTCCATCGAAGGACCCGTCAGTGGTACGAGCACTTACTTGAGCAGCAATGCTAGTGCCTTATCCACTGTTGCCGCTTCAGCCCCAGGTACTGCTTCGTCTTCCTCATTCCAGAACAGTGGTATTTCAAGTTTGACTTCAGGGAAAAACACTGAGAAGGCAACTTCCTCTCTTCTACAAGAAGACCAATTGTAA 2553 0.4579 MYEQSDWVHFKMGLGFIRILTLSAIFFTAIASSAAAISPGSTLLASNTNQRWSSPNDTFSLHFVPSNPQTEPPTFIAAIVYSGDVPVIWSAGNGSAVDSGGSFQFLSSGTLRLLNGSGSIVWDSRTSNLGVSSATLQGDGNLVLSNGTATVWSTFDNPTDTIVPSQNFTTGMVLRSGLYSFSLISSGNLTLKWNDSVEYWNQGLNASVNAKLNSPVLMLQSIGLLQLYDSNLSAPAVIAYSSDYAEGSDVLRILKIDSDGNLRIYSSLRNSGTVTARWAAVDQCEVFGYCGNYGICSYNDTDPICGCPSQNFEMIDPSNSRKGCRRNLNLDDCPGSATMLQLEHTQFLTYPPELSAEIFFIGISACRGNCLAGNCFASTSLSDGTGQCYIKTSNFISGYQNPALPSTSYVKVCGPVAPNPPSSLAGAEKKHRGRVPAWIVVLVVLGTLLALIAFEGGLWFWCCRNRTILGGLSAQYALLEYASGAPVQFSYKDLQRATKGFKEKLGAGGFGAVYRGVLANKTVVAVKQLEGIEQGEKQFRMEVATISSTHHLNLVRLIGFCSEGRHRLLVYEFMKNSSLDNLLFVTEEQSGKLLNWEYRFNIALGTARGITYLHEECRDCIVHCDIKPENILLNENYIAKVSDFGLAKLINPKDHRHRTLTSVRGTRGYLAPEWLANLPITSKSDIYSYGMVLLEIVSGRRNFELLDDRNRKKFSDWAYQEFEKGNIMGILDKRLNDQEVDMEQVQRAIQVSFWCIQEHPSHRPIMSRVVQMLEGITEIEKPPAPKSSIEGPVSGTSTYLSSNASALSTVAASAPGTASSSSFQNSGISSLTSGKNTEKATSSLLQEDQL 850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g3400 850 Pfam S-locus glycoprotein domain 245 308 IPR000858 GO:0048544
Alju01g3400 850 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 33 157 - -
Alju01g3400 850 ProSiteProfiles Bulb-type lectin domain profile. 159 277 IPR001480 -
Alju01g3400 850 Gene3D - 30 157 IPR036426 -
Alju01g3400 850 Pfam D-mannose binding lectin 87 170 IPR001480 -
Alju01g3400 850 SMART blect_4 43 158 IPR001480 -
Alju01g3400 850 SUPERFAMILY Protein kinase-like (PK-like) 482 774 IPR011009 -
Alju01g3400 850 Gene3D - 158 280 IPR036426 -
Alju01g3400 850 Gene3D Transferase(Phosphotransferase) domain 1 574 787 - -
Alju01g3400 850 FunFam S-receptor-like serine/threonine-protein kinase 473 573 - -
Alju01g3400 850 MobiDBLite consensus disorder prediction 810 850 - -
Alju01g3400 850 ProSiteProfiles Protein kinase domain profile. 499 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g3400 850 SUPERFAMILY alpha-D-mannose-specific plant lectins 86 203 IPR036426 -
Alju01g3400 850 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 574 783 - -
Alju01g3400 850 Pfam Protein kinase domain 502 771 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g3400 850 ProSitePatterns Protein kinases ATP-binding region signature. 505 527 IPR017441 GO:0005524
Alju01g3400 850 SMART serkin_6 499 773 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g3400 850 PIRSF SRK 9 831 IPR024171 GO:0004674
Alju01g3400 850 ProSitePatterns Serine/Threonine protein kinases active-site signature. 621 633 IPR008271 GO:0004672|GO:0006468
Alju01g3400 850 Gene3D Phosphorylase Kinase; domain 1 472 573 - -
Alju01g3400 850 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 158 280 - -
Alju01g3400 850 CDD STKc_IRAK 505 776 - -
Alju01g3400 850 PANTHER OS07G0415500 PROTEIN 17 785 - -
Alju01g3400 850 ProSiteProfiles Bulb-type lectin domain profile. 28 157 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g3400 Alju-ChrAlju01 62008338 62010890 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g3400 472 783 Receptor kinase-like Gene Family AT5G20050 45.231 2.35e-82 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Alju01g3400 Pkinase 8.6e-51 CL0016