Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g3392 ATGTTGGTGAAGAGATTTACCAAAATGTACACATCAAGGAAGAATATCCACAAAGATCAGGATGCCGAGCCTACTGAATTTGAGGAGACTGTTGCACAGTACCTATTTGACTTGGAGAACACTAATCAGGAGCTAAAAAGTGACCTGAAAGATCTCTACATAAACCAAGCAGTCCAAATGGATGTCCCTGGAAATCGCAAGGCCATAGTTATCTATGTGCCTTACAGGTTGAGAAAGGCATTCCGCAAAATTCATCTCCGGCTTGTCAGAGAGCTGGAGAAAAAATTCAGTGGCAAGGATGTTGTCTTGATTGCCACTAGAAGAATTGTGCGGCCACCAAAGAAAGGCTCTGCTGTTCAACGACCACGCTCTCGCACATTAACTGCTGTTCATGATGTCTTCTTGGAGGATGTTGCGCATCCTGCTGAAATTGTTGGCAAGCGAACCAGATTCCGTGTCGATGGATCAAAGATAATGAAGGTTTTGTTGGACCCTAAGGAACGCAACAACACTGAATACAAGATGGAGACTTTTTCTGCAGTTTACAGGAAGCTTACTGGGAAAGATGTAGTAGTCGAGTATCCAATCACAGAAACTTGA 600 0.435 MLVKRFTKMYTSRKNIHKDQDAEPTEFEETVAQYLFDLENTNQELKSDLKDLYINQAVQMDVPGNRKAIVIYVPYRLRKAFRKIHLRLVRELEKKFSGKDVVLIATRRIVRPPKKGSAVQRPRSRTLTAVHDVFLEDVAHPAEIVGKRTRFRVDGSKIMKVLLDPKERNNTEYKMETFSAVYRKLTGKDVVVEYPITET 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g3392 199 Pfam Ribosomal protein S7e 16 194 IPR000554 GO:0003735|GO:0005840|GO:0006412
Alju01g3392 199 PANTHER 40S RIBOSOMAL PROTEIN S7 9 198 IPR000554 GO:0003735|GO:0005840|GO:0006412
Alju01g3392 199 ProSitePatterns Ribosomal protein S7e signature. 87 100 IPR000554 GO:0003735|GO:0005840|GO:0006412
Alju01g3392 199 Coils Coil 35 55 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g3392 Alju-ChrAlju01 61814779 61817381 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g3392 9 199 Cytoplasmic Ribosomal Protein Gene Family AT3G02560 77.487 1.33e-111 315