Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g3349 ATGCGGATGAGCTGTAATGGATGCCGAGTTTTGAGAAAGGGTTGCAGTGAAAGTTGTAGTATAAGGCCGTGTTTGCAGTGGATTAAAAGCCCAGAGTCTCAGGCTAATGCTACGGTGTTTCTCGCCAAGTTCTACGGCCGTGCTGGCCTCATGAACCTCATTAACGCCGGTCCTGAACACCTTCGTCCTGCGATTTTTCGATCTTTATTATATGAGGCATGCGGGCGGATAGTTAACCCGATTTATGGGTCCGTCGGGTTGTTATGGTCCGGGAGCTGGCAGTTATGTCAGGCCGCCGTGGAAGCCGTCTTGAAGGGCGCTCCAATCACGCCAATCACCTCCGAGGCGGCAACGAACGGGAGGGGCCCACCTCTCAAGGCTTACGACATACGCCACGTGTCTAAGGACGAGAACTTGGCCGCGTCAAACGACGCTCAACGGGTCGTCAAAACTCGCTCCAGGTTCAAGCGCTCCGTCGGCGGCGGCGGCGGCAATCCCAAAGCCAACAACAAAGCAGCCACCGGCTCGTTATCCGTTCAGCCCTCTCCTCCAGCAGTAGATGCTCCGATCAATTCCTGGACCGGGTGTTGTGCTGCTGCTGCTGCTAAACCGGTTGTGAACCGGTCGGGGAGTCACGAGTCATCGTTAAGCCACCAGTCGGAGGCGGTTAACGAGAGCAAAGAGAGCGAGAGCATGATCTCCGTGGAGACCGCCGAGACGTCGATCCTCTTCCGAGCCGAACCGGAATCCACCGGGAAGGCCAGGGAACGAACCGTCGATGAAACAACCGATATAGGCCTAGAGTTGACACTAGGGTTCGAACCGGCGTCACGTGCGAATCACGTGGTACCAGTGAAGAAGAGGAAGATCGAGTTCAGAGATAGTGAGAACTGGTCATCGTACAAAATGAACCTGGGACTTGAGTTCTAG 930 0.5538 MRMSCNGCRVLRKGCSESCSIRPCLQWIKSPESQANATVFLAKFYGRAGLMNLINAGPEHLRPAIFRSLLYEACGRIVNPIYGSVGLLWSGSWQLCQAAVEAVLKGAPITPITSEAATNGRGPPLKAYDIRHVSKDENLAASNDAQRVVKTRSRFKRSVGGGGGNPKANNKAATGSLSVQPSPPAVDAPINSWTGCCAAAAAKPVVNRSGSHESSLSHQSEAVNESKESESMISVETAETSILFRAEPESTGKARERTVDETTDIGLELTLGFEPASRANHVVPVKKRKIEFRDSENWSSYKMNLGLEF 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g3349 309 Pfam Lateral organ boundaries (LOB) domain 4 103 IPR004883 -
Alju01g3349 309 MobiDBLite consensus disorder prediction 209 231 - -
Alju01g3349 309 MobiDBLite consensus disorder prediction 143 183 - -
Alju01g3349 309 PIRSF AS2 1 309 IPR017414 -
Alju01g3349 309 MobiDBLite consensus disorder prediction 169 183 - -
Alju01g3349 309 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Alju01g3349 309 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 3 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g3349 Alju-ChrAlju01 60760879 60762001 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g3349 1 307 AS2 family AT3G02550 55.128 2.16e-103 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Alju01g3349 LOB 2.1e-24 No_clan