Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g3341 ATGGCAGATATTACTCCGACGACGTCTCTAAAACTCTTTGGCATTAACATTCACAAAGTTTCAGAGTCCGATCACGAGGCCTTGAACGCCGGCGGCAACGATCACCGGAAATACGAGTGCCAGTACTGCTGCCGTGAGTTTGCTAATTCACAAGCGTTGGGAGGTCACCAAAACGCACACAAGAAAGAAAGACAGCTTCTAAAGCGAGCTCAAATGCAAGCTGCTCGAACTGCTTTTTCTGCTTCACATCACAGTTATCATCACAACCCAATCTTATTGCCTCCACCTGATATCCTCGCCGGATCGCCACCCCCACCACCATCGCCGCAGTATCCGTGGCTGCACAGTTTGCCACATAACCCACCTCCTCCGGTGTATCATTCTGGGACATTCGGTGTGTGTGTGAATTCTGGTTTTTTAGGTTTGCATGATCATCCTTCATCACGGCCCTCATCTACGGCGGCATATGGTGGCTTTACGGGCAGTGATGGTAGCCAACGAGGCTTCAGTTTAGATTTGCAACTTAGTCTATGA 534 0.4944 MADITPTTSLKLFGINIHKVSESDHEALNAGGNDHRKYECQYCCREFANSQALGGHQNAHKKERQLLKRAQMQAARTAFSASHHSYHHNPILLPPPDILAGSPPPPPSPQYPWLHSLPHNPPPPVYHSGTFGVCVNSGFLGLHDHPSSRPSSTAAYGGFTGSDGSQRGFSLDLQLSL 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g3341 177 ProSitePatterns Zinc finger C2H2 type domain signature. 40 60 IPR013087 -
Alju01g3341 177 SUPERFAMILY beta-beta-alpha zinc fingers 35 65 IPR036236 -
Alju01g3341 177 Gene3D Classic Zinc Finger 20 89 - -
Alju01g3341 177 ProSiteProfiles Zinc finger C2H2 type domain profile. 38 65 IPR013087 -
Alju01g3341 177 PANTHER ZINC FINGER PROTEIN 5 7 177 IPR044299 GO:0010090
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g3341 Alju-ChrAlju01 60188106 60188639 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g3341 5 106 C2H2 Transcription Factor Family AT1G67030 55.357 4.24e-31 110