Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g3307 ATGGCTTTACAAAACATTGGAGCTGGAAACAGTGATGATGCCTTCTATAGGTATAAGATGCCCAAAATGCTAACCAAAATTGAGGGCAGAGGTAATGGCATCAAAACCAACATTGTCAATATGGTTGACATTGCAAAGGCTTTGGCTAGGCCAGCTTCTTATACAACCAAGTATTTTGGTTGTGAGCTTGGAGCTCAATCCAAATTTGACGAGAAAACCGGGACTTCTCATGTGAACGGGGCACATGATACTCCAAAACTTGCTGGTCTTCTGGAGAACTTCATTAAGAAATATGTTCAGTGCTACGGTTGCGGGAATCCTGAAACTGAGATCTTGATCACCAAGAGTCAAATGATCCAGCTAAAATGTGCTGCTTGTGGGTTTGTGTCAGATGTGGATATGAGAGACAAGCTGACCACCTTTATACTCAAGAATCCTCCTGAACCCAAGAAGGGGTCCAAAGACAAGAAGGCCATGAGGAGGGCTGAGAAAGAGAGACTGAAAGAAGGTGAAGCAGCTGATGAGGAACAGAAGAAATTGAAAAAGGAGGGTAAGAAGAAGGTTTCTTCCTCTTCCAAGGATGGAACCACAAAAACAAAAAAGAAATCCAATAGCTCTGATGAAGACCGTGCATCGCCTCCTCATGGTAAGATTCACGAGGAGGCTCGTGTTGAAGAGGAAGAAGGTGATGATGATATCCAATGGCAAACAGATACATCACTGGCGGCTGCCCGCCAACGTATCCAGGAGCAATTAAGTGCTGTGACAGCTGATATGGTCATGCTCTCCACAGATGAGTCAGAGAAGGCAAAAGAGGCTAGCAAGGCAAATGGTGGGTCTGAGGATGGGAGCTCAATGCCCTACAAGTCTCTTGTTGAGGAAGTCAAATCTAATTTGCAGAAAGGTGTTTCTGCTAAGGAACTGCAGCACCGTCTTGCTGCCCTTACTGCATCTTCTCAGGAAAAAATGTGCGCTTTGTTTGAGGCCCTTGTTGCAGGTGTTGAGAAAGGATTCACCAAGGAACTTGTCAAGAAGAAGAACTATCTTGCTGCTGCTGTTGCTGGGGAAGAAGGATCGCAGATGCTGTTGCTGCATGCAATTGAGGACTTCTGTTGTAAGAGCAGTGCCAATGCTTTGAAGGAGGTTGCCTTAATGCTGAAGGCGCTGTATGATGCCGATTTACTGGAGGAAGAGCACATAGTGCAATGGTATCAGAAAGGGCTAAAGGGAGATTCCAAGGACTCCAAGATATGGAAGAATGCTCAACCCTTCATTGATTGGCTTCAGAGTGCAGAATCGGAATCAGAGGAAGAGTAA 1317 0.4533 MALQNIGAGNSDDAFYRYKMPKMLTKIEGRGNGIKTNIVNMVDIAKALARPASYTTKYFGCELGAQSKFDEKTGTSHVNGAHDTPKLAGLLENFIKKYVQCYGCGNPETEILITKSQMIQLKCAACGFVSDVDMRDKLTTFILKNPPEPKKGSKDKKAMRRAEKERLKEGEAADEEQKKLKKEGKKKVSSSSKDGTTKTKKKSNSSDEDRASPPHGKIHEEARVEEEEGDDDIQWQTDTSLAAARQRIQEQLSAVTADMVMLSTDESEKAKEASKANGGSEDGSSMPYKSLVEEVKSNLQKGVSAKELQHRLAALTASSQEKMCALFEALVAGVEKGFTKELVKKKNYLAAAVAGEEGSQMLLLHAIEDFCCKSSANALKEVALMLKALYDADLLEEEHIVQWYQKGLKGDSKDSKIWKNAQPFIDWLQSAESESEEE 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g3307 438 Gene3D - 280 429 - -
Alju01g3307 438 SUPERFAMILY Translation initiation factor 2 beta, aIF2beta, N-terminal domain 10 101 IPR016189 GO:0003743|GO:0006413
Alju01g3307 438 Gene3D - 105 145 - -
Alju01g3307 438 Pfam eIF4-gamma/eIF5/eIF2-epsilon 360 438 IPR003307 GO:0005515
Alju01g3307 438 ProSiteProfiles W2 domain profile. 277 438 IPR003307 GO:0005515
Alju01g3307 438 SMART 542_3 346 434 IPR003307 GO:0005515
Alju01g3307 438 MobiDBLite consensus disorder prediction 143 232 - -
Alju01g3307 438 Coils Coil 159 179 - -
Alju01g3307 438 CDD W2_eIF5 287 431 - -
Alju01g3307 438 FunFam Eukaryotic translation initiation factor 5 105 145 - -
Alju01g3307 438 SUPERFAMILY ARM repeat 288 432 IPR016024 -
Alju01g3307 438 FunFam Eukaryotic translation initiation factor 5 1 104 - -
Alju01g3307 438 Gene3D - 3 104 - -
Alju01g3307 438 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 437 IPR045196 GO:0003743|GO:0006413
Alju01g3307 438 Pfam Domain found in IF2B/IF5 11 127 IPR002735 GO:0003743|GO:0006413
Alju01g3307 438 SUPERFAMILY Zinc-binding domain of translation initiation factor 2 beta 98 133 IPR016190 GO:0003743|GO:0006413
Alju01g3307 438 MobiDBLite consensus disorder prediction 265 287 - -
Alju01g3307 438 MobiDBLite consensus disorder prediction 148 224 - -
Alju01g3307 438 SMART eIF2Bneu4 15 129 IPR002735 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g3307 Alju-ChrAlju01 59315361 59316677 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g3307 1 431 Eukaryotic Initiation Factors Gene Family AT1G77840 64.679 0.0 512