Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g3276 ATGGAGAACTTCGATTCAAAGAGCGGTTTCTGTTCAGTTTCTAGAACCTTCCACAGCCTCAGACCCCCCGTTCATCTTCCTCCTTCTCACTCTCCTCTCTCTGCTTCACAATACGCTATCTCTCTCCATCTCAAATCGCCCTGGTCCGACTCAGTCCCCGCCCTTATCGACTCAGTCTCCGGCCACCGAGTTTCCTTCTCCGAGTTCATCCATTCCTCACAAACCTTAGCATCTAATCTTCAATCTCTCGTAGGCCTCTCCAAAGGCGACACAGCCTTTGTATTATGCCCAAATCTCATTCAGGTCCCGATCCTCTACTTCGCCCTGCTTTCCCTCGGCGTCGTCGTCTCTCCGGCGAACCCAATCAGCACACGCGCCGAAATTTCCCACCTCTTCCAGATATCGTCGCCGGTAATTGCCTTCACGACGGCGTCCACAGCACATAACCTTCCGCACGATCTGCAACTCCGAGTTATCCTTCTCGACTCACCTGAGTTCGACTCGCTGATGACAACAAGAAGCGTCGCGAAACCAGTGAGCCCATGCGTTGAGGTGAGCCAATCAGACATAGCCGCGATTTTGTACTCTTCGGGGACCACGGGGAAGGTGAAGGGAGTAATGCTGACTCACCGGAATCTGATAGCATCAGCGGCCAGTTATGACGCGGCTCGAACTCAGAGAAAAATTCCGGCGGTTATCCTCTACACAGTGCCGTATTTTCACGTGTACGGCTTCACGTACTGTTTGAGGTCGGTGGTGTTGTCGGAGACGGTGGTGTTGATGGAGAGATTCAGAATGGAGAAGATGCTGCGGGCTGTGGACGAGTTCAGAGTGACTCACGTCGCGGTGGCTCCGCCGGTGGTGGTGGCACTGGCAAAAGGAGATGTAACGGACTGTTACGATTTGAGCTCGTTGGAAGGCATCTCTTGTGGGGCGGCTCCGCTAGGAAAGGACGCCGTGGTGGCTTTCAAATCGAAGTTCCCCAAAGTCGTGCTCGTCCAGGGATATGGGCTAACAGAAACAACGGCATCGATCTGTCGAACAATAGGAGAAGTGGAGAGCAATATGGTAGGAACAACGGGGAAGCTCTTAGCTGGGGTTGATGCCAAAATTGTGGACCCACACAGTGGACTAGCCCTGTCTCCTGGCGAGGAAGGCGAACTTTGGCTTAGAGGACCTCCTATAATGAGAGGTTATGTAGGGGATGCAGAAGCAAACTCGTCCATTTTCGTTGATGGGTGGTTGAGGACAGGAGATTTGTGCTATTTTGATCACCAAGGCTACCTTTACGTTGTTGATAGATTGAAAGAATTGATCAAATACAAGGGATATCAGGTTGCTCCTGCGGAGCTGGAAAACTTGCTTCAGTCCCATCCACAGATCCAGGACGCTGCAGTTATTCCTTACCCTGATGAAGAAGCAGGGCAGGTGCCCATGGCCTTTGTGGTGAGACAACCCCACAGTTCACTAAGCGAAGCGGACGTAATTGACTTTGTTGCCAAGCAGGTTTCACCTTACAAAAAAATAAGGCGCATATTATTTGTGAGTTCCATACCAAAGAATGCAGCAGGAAAAATTTTGAGGAAAGAATTGAGTAAAACTTTCCTCCATCAATCTATATCTAAATTGTAA 1632 0.5049 MENFDSKSGFCSVSRTFHSLRPPVHLPPSHSPLSASQYAISLHLKSPWSDSVPALIDSVSGHRVSFSEFIHSSQTLASNLQSLVGLSKGDTAFVLCPNLIQVPILYFALLSLGVVVSPANPISTRAEISHLFQISSPVIAFTTASTAHNLPHDLQLRVILLDSPEFDSLMTTRSVAKPVSPCVEVSQSDIAAILYSSGTTGKVKGVMLTHRNLIASAASYDAARTQRKIPAVILYTVPYFHVYGFTYCLRSVVLSETVVLMERFRMEKMLRAVDEFRVTHVAVAPPVVVALAKGDVTDCYDLSSLEGISCGAAPLGKDAVVAFKSKFPKVVLVQGYGLTETTASICRTIGEVESNMVGTTGKLLAGVDAKIVDPHSGLALSPGEEGELWLRGPPIMRGYVGDAEANSSIFVDGWLRTGDLCYFDHQGYLYVVDRLKELIKYKGYQVAPAELENLLQSHPQIQDAAVIPYPDEEAGQVPMAFVVRQPHSSLSEADVIDFVAKQVSPYKKIRRILFVSSIPKNAAGKILRKELSKTFLHQSISKL 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g3276 543 Gene3D - 437 538 IPR045851 -
Alju01g3276 543 FunFam 4-coumarate--CoA ligase 2 437 538 - -
Alju01g3276 543 Pfam AMP-binding enzyme 53 441 IPR000873 -
Alju01g3276 543 Pfam AMP-binding enzyme C-terminal domain 450 525 IPR025110 -
Alju01g3276 543 CDD 4CL 22 531 - -
Alju01g3276 543 Gene3D - 27 436 IPR042099 -
Alju01g3276 543 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 10 533 - -
Alju01g3276 543 ProSitePatterns Putative AMP-binding domain signature. 193 204 IPR020845 -
Alju01g3276 543 SUPERFAMILY Acetyl-CoA synthetase-like 53 537 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g3276 Alju-ChrAlju01 58681565 58693083 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g3276 5 543 Monolignol Biosynthesis Gene Families AT5G63380 50.543 0.0 553