Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g3275 ATGGCCGGAAAGGGGGAAGGACCGGCGATCGGTATAGATCTAGGAACAACCTACTCTTGTGTCGGAGTATGGCAGCACGATCGTGTTGAGATCATCGCCAACGACCAAGGCAACCGTACGACGCCGTCCTATGTTGCTTTCACCGATACCGAGAGATTGATCGGAGATGCCGCCAAGAACCAGGTCGCCATGAACCCAATCAACACCGTTTTTGATGCTAAGAGGTTGATTGGTAGGAGAATCTCTGACCCTTCCGTGCAGAGTGATATTAAGTTGTGGCCATTCAAGGTTGTTTCTGGCCCCGGTGAGAAACCAATGATTGGTGTTAATTACAAGGGAGAGGAGAAGCTATTTTCTGCTGAGGAAATCTCATCCATGGTTTTGATCAAGATGCGTGAGATTGCAGAGGCTTACCTTGGTTTAACGGTGAAGAACGCCGTCGTCACTGTTCCTGCATACTTCAATGACTCTCAGCGTCAGGCCACCAAGGATGCCGGTGTTATTGCCGGACTCAATGTCATGCGAATCATAAATGAGCCCACCGCTGCAGCCATAGCTTACGGGCTTGACAAGAAAGCTACCAGCTCTGGTGAGAAGAATGTGTTGATCTTTGACCTTGGTGGTGGTACTTTTGATGTCTCTCTCCTCACCATTGAGGAGGGTATCTTTGAAGTTAAGGCCACTGCTGGTGACACTCACCTTGGAGGAGAGGACTTCGATAACAGAATGGTGAACCACTTTGTTCAAGAGTTCAAGAGGAAGAACAAGAAGGACATTAGTGGAAATCCAAGAGCCCTCAGGAGATTGAGAACAGCTTGTGAGAGGGCAAAGAGGACACTCTCATCCACTGCACAAACCACAATTGAGATTGATTCTTTGTTTGAGGGTATTGATTTCTACTCAACAATCACTCGTGCCAGATTTGAGGAACTCAACATGGACCTCTTCAGGAAGTGTATGGAGCCTGTGGAGAAGTGTCTCAGAGATGCTAAGATGGACAAGAGCAGCATTCACGATGTTGTCCTTGTTGGTGGCTCTACCAGAATTCCCAAAGTGCAACAACTATTGCAGGACTTCTTCAATGGCAAAGATCTCTGCAAGAGCATCAACCCTGATGAGGCAGTTGCCTACGGTGCAGCCGTCCAAGCTGCTATCTTGAGCGGTGAAGGTAATGAGAAGGTTCAAGACTTGTTGCTGCTTGATGTCACTCCACTCTCCTTGGGTTTGGAGACTGCCGGAGGAGTCATGACTGTATTGATTCCCAGAAACACCACCATTCCTACCAAGAAGGAGCAAGTTTTCTCCACTTATTCCGATAACCAACCTGGTGTCTTGATCCAAGTCTATGAAGGTGAAAGAACAAGAACTAGGGACAACAACTTGTTGGGTAAGTTTGAGCTCTCAGGAATTCCCCCAGCTCCAAGGGGTGTTCCTCAAATCACTGTCTGCTTTGATATCGATGCCAACGGGATCTTGAATGTGTCTGCTGAGGACAAAACAACTGGACAGAAGAACAAGATCACCATTACCAATGACAAGGGAAGGCTCTCAAAGGAGGAAATTGAGAAGATGGTTCAGGAAGCAGAGAAGTACAAGGCAGAAGATGAGGAGCACAAGAAGAAGGTTGAAGCAAAGAATGCCCTGGAGAACTACTCGTACAACATGAGGAACACCATTAAAGATGAGAAGATCAGCTCAAAGCTGTCTGCAGATGACAAGAAGAAGATTGAGGATGCAATTGAGCAGGCCATTCAGTGGCTTGACTCCAACCAGCTCGCTGAGGCGGATGAGTTTGAAGACAAGATGAAGGAGCTGGAGAGCATCTGCAACCCAATCATTGCTAAGATGTACCAAGGTGGAGCTGATGTTGGTGGTGCCGGCATGGATGAAGATGATGATGTTCGCCCATCTGGTGGCAGCGGCGCCGGCCCTAAGATCGAGGAGGTCGACTAA 1953 0.4803 MAGKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPINTVFDAKRLIGRRISDPSVQSDIKLWPFKVVSGPGEKPMIGVNYKGEEKLFSAEEISSMVLIKMREIAEAYLGLTVKNAVVTVPAYFNDSQRQATKDAGVIAGLNVMRIINEPTAAAIAYGLDKKATSSGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDNRMVNHFVQEFKRKNKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLFEGIDFYSTITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSSIHDVVLVGGSTRIPKVQQLLQDFFNGKDLCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDEEHKKKVEAKNALENYSYNMRNTIKDEKISSKLSADDKKKIEDAIEQAIQWLDSNQLAEADEFEDKMKELESICNPIIAKMYQGGADVGGAGMDEDDDVRPSGGSGAGPKIEEVD 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g3275 650 ProSitePatterns Heat shock hsp70 proteins family signature 3. 340 354 IPR018181 -
Alju01g3275 650 Gene3D - 10 384 - -
Alju01g3275 650 CDD HSPA1-2_6-8-like_NBD 9 387 - -
Alju01g3275 650 FunFam Heat shock cognate 70 kDa protein 2 319 362 - -
Alju01g3275 650 FunFam Heat shock 70 kDa 235 318 - -
Alju01g3275 650 Coils Coil 518 545 - -
Alju01g3275 650 FunFam heat shock 70 kDa protein-like 363 388 - -
Alju01g3275 650 FunFam Heat shock 70 kDa protein 539 650 - -
Alju01g3275 650 Gene3D - 71 126 - -
Alju01g3275 650 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 392 549 IPR029047 -
Alju01g3275 650 Gene3D - 545 619 IPR029048 -
Alju01g3275 650 FunFam Heat shock 70 kDa 391 545 - -
Alju01g3275 650 PANTHER HEAT SHOCK PROTEIN 70KDA 9 583 IPR013126 GO:0005524|GO:0140662
Alju01g3275 650 FunFam Heat shock 70 kDa protein 198 260 - -
Alju01g3275 650 Pfam Hsp70 protein 9 618 IPR013126 GO:0005524|GO:0140662
Alju01g3275 650 FunFam heat shock 70 kDa protein-like 71 126 - -
Alju01g3275 650 ProSitePatterns Heat shock hsp70 proteins family signature 2. 203 216 IPR018181 -
Alju01g3275 650 SUPERFAMILY Actin-like ATPase domain 8 191 IPR043129 -
Alju01g3275 650 Gene3D - 192 366 - -
Alju01g3275 650 ProSitePatterns Heat shock hsp70 proteins family signature 1. 12 19 IPR018181 -
Alju01g3275 650 Gene3D Actin; Chain A, domain 4 235 318 - -
Alju01g3275 650 SUPERFAMILY Actin-like ATPase domain 197 388 IPR043129 -
Alju01g3275 650 PRINTS 70kDa heat shock protein signature 8 21 - -
Alju01g3275 650 PRINTS 70kDa heat shock protein signature 396 415 - -
Alju01g3275 650 PRINTS 70kDa heat shock protein signature 477 493 - -
Alju01g3275 650 PRINTS 70kDa heat shock protein signature 36 48 - -
Alju01g3275 650 PRINTS 70kDa heat shock protein signature 58 66 - -
Alju01g3275 650 PRINTS 70kDa heat shock protein signature 146 166 - -
Alju01g3275 650 PRINTS 70kDa heat shock protein signature 209 219 - -
Alju01g3275 650 PRINTS 70kDa heat shock protein signature 369 389 - -
Alju01g3275 650 PRINTS 70kDa heat shock protein signature 337 353 - -
Alju01g3275 650 MobiDBLite consensus disorder prediction 620 650 - -
Alju01g3275 650 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 543 621 IPR029048 -
Alju01g3275 650 FunFam Heat shock protein 70 10 197 - -
Alju01g3275 650 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 391 544 IPR029047 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g3275 Alju-ChrAlju01 58673266 58675830 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g3275 1 650 Calmodulin-binding Proteins AT3G12580 93.088 0.0 1228