Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g3258 ATGATGTTATCTTGTGGAGGAGAAAATGAGACGGCGTCGTGTTTTCGTCTGGCTCATCGTGGGGATCCACCACCACCAAGCGCCACCGCGACGGTGTTGCCGACCCTTGGACAGTTCTTGAATTACTACGGTGACGTAGGGAAGGAAGAAACAGGAGACGGCGGCGACACGACGGAGCACCACGCCCTCGATATGGCCCACGTCGGACTCGAGCCTCGATCGGTGCCTTTCGTGCTCTCGTTCAACAACCTCACTTACAGTGTGAAGGTTCGCCGGAAAATGAGATTCTCAATGCTGTTTCCGAAGTTGAAGGGAACGGCGGTGGCCGACGACGACGGAACTAAGACTCTGCTCAATGGTATCTCCGGCGAGGCACGCGACGGAGAGATTCTAGCCGTCATGGGGGCTAGCGGTTCCGGGAAATCAACTCTAATCGACGCGTTGGCCAACAGAATTGCTAAGGGAAGCTTAAAGGGAAAGCTCGCGTTAAACGGCGAGGCCTTAGAATCACGTCTTCTAAAAGTGATATCAGCTTACGTCATGCAAGACGACCTTCTCTTTCCGATGCTCACAGTGGAAGAAACCCTAATGTTCGCAGCTGATTTCCGATTGCCACGCACACTCTCAAGATCCAAGAAGAAGATACGAGTACAAGCACTCATCGACCAGCTCGGTCTCCGAAACGCCGCCAAAACCGTCATCGGCGACGAAGGCCACCGTGGCGTCTCCGGCGGCGAACGCCGCCGTGTCTCCATCGGCATCGACATAATCCACGACCCAATCATCTTGTTCCTCGACGAACCAACCTCCGGTCTCGATTCCACCAGCGCCTACTTGGTGGTGAAGGTTTTACAGCGAATCGCCCACACCGGAAGCATCGTGATCATGTCCGTACACCAACCTAGCTCCCGAATTCTCGGCCTCCTCGACAGAATGATCTTCTTGTCACGTGGCCAAACAGTTTTCAGCGGCTCACCGTTACAACTTCCGATCTTCTTCTCCGAGTTCGGCCACCCGATACCGGAAAACGAGAACCGGACCGAGTTCGCTCTTGACCTAATTCGCGAGCTCGAATCCTCACCTGGTGGAACAAAAAGCTTGGTCGAGTTCAACAAATCCTGGCAAAGCATCATGAATTTGCATGATACTAAGATTAATAAACAGAATGATAATTTGTCTCTGAAAGATGCCATCAGTGCCAGCATTTCCAGAGGAAAACTAGTGTCTGGTGCGACACCGGCGGCGAACACCCTAAGCCCGACTTCGATGGTTCCGACGTTTGCGAATCCATTCTGGGTGGAGATGGCGAAACTGTCAAAAAGATCATTCACGAATTCACGTAGAATGCCTGAGCTATTCGGGATTCGGTTGGCGGCGATTTTGGTGACTGGGTTTATTTTAGCAACCATGTTTTGGAAATTAGATAACTCTCCAAAAGGTGTCCAAGAAAGACTCGGCTTCTTCGCCTTCGCCATGTCCACCACCTTCTACACCACCGCCGACGCGCTTCCGGTGTTCCTCCAAGAACGTTACATCTTCATGAGAGAAACCGCCCACAATGCTTACCGGCGATCATCCTATCTCATATCCCATGCATTAGTCTCCTTACCAACACTCCTCATCCTCTCCCTCACCTTCGCGGCCACGACGTTTTGGGCCGTCGGGCTCGACGGAGGCTTACCGGGCTTCCTCTTCTACTTCCTCGTCATCTTCGCCTCGTTCTGGGCCGGAAACTCCTTTGTCACCTTCCTCTCCGGCGTAGTACCGCACGTGATGTTGGGGTACACAATAGTGGTAGCCATATTAGCATATTTCTTATTATTCAGTGGATTCTTCATTCATAGAGACAGAATTCCAAGTTATTGGATTTGGTTTCATTATTTGTCTCTGGTGAAGTATCCGTATGAAGCTGTTCTTCAGAATGAGTTTGATGACCCGGTGAAGTGTTTCATGAGAGGGGTTCAGATTTTTGATAATACACCACTTGGGGTTGTACCTGGTTCAACAAAATTGAAGCTTTTGGAGAGTTTGAGTAATACTTTGGGGATGAAAATTACGAGCTCGACGTGTTTGACGACTGGTTCTGATATTTTGCAGCAAAATGGGATTACTCAGTTGAGTAAGTGGAATTGCTTGTGGGTGACTGTGGCTTGGGGATTTTTGTTTAGGGTTTTGTTTTACTTCTCTTTGCTGTTGGGAAGTAAGAACAAGAGGAGGTGA 2220 0.5018 MMLSCGGENETASCFRLAHRGDPPPPSATATVLPTLGQFLNYYGDVGKEETGDGGDTTEHHALDMAHVGLEPRSVPFVLSFNNLTYSVKVRRKMRFSMLFPKLKGTAVADDDGTKTLLNGISGEARDGEILAVMGASGSGKSTLIDALANRIAKGSLKGKLALNGEALESRLLKVISAYVMQDDLLFPMLTVEETLMFAADFRLPRTLSRSKKKIRVQALIDQLGLRNAAKTVIGDEGHRGVSGGERRRVSIGIDIIHDPIILFLDEPTSGLDSTSAYLVVKVLQRIAHTGSIVIMSVHQPSSRILGLLDRMIFLSRGQTVFSGSPLQLPIFFSEFGHPIPENENRTEFALDLIRELESSPGGTKSLVEFNKSWQSIMNLHDTKINKQNDNLSLKDAISASISRGKLVSGATPAANTLSPTSMVPTFANPFWVEMAKLSKRSFTNSRRMPELFGIRLAAILVTGFILATMFWKLDNSPKGVQERLGFFAFAMSTTFYTTADALPVFLQERYIFMRETAHNAYRRSSYLISHALVSLPTLLILSLTFAATTFWAVGLDGGLPGFLFYFLVIFASFWAGNSFVTFLSGVVPHVMLGYTIVVAILAYFLLFSGFFIHRDRIPSYWIWFHYLSLVKYPYEAVLQNEFDDPVKCFMRGVQIFDNTPLGVVPGSTKLKLLESLSNTLGMKITSSTCLTTGSDILQQNGITQLSKWNCLWVTVAWGFLFRVLFYFSLLLGSKNKRR 739
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g3258 739 Gene3D - 104 331 IPR027417 -
Alju01g3258 739 Pfam ABC transporter 118 270 IPR003439 GO:0005524
Alju01g3258 739 FunFam ABC transporter G family member 6 107 333 - -
Alju01g3258 739 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 64 725 - -
Alju01g3258 739 Pfam ABC-2 type transporter 438 643 IPR013525 GO:0016020|GO:0140359
Alju01g3258 739 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 103 342 IPR003439 GO:0005524
Alju01g3258 739 SMART AAA_5 127 319 IPR003593 GO:0016887
Alju01g3258 739 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 113 329 IPR027417 -
Alju01g3258 739 ProSitePatterns ABC transporters family signature. 242 256 IPR017871 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g3258 Alju-ChrAlju01 58466461 58468680 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g3258 117 303 Calmodulin-binding Proteins AT2G36910 28.947 2.00e-10 62.8