Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g3257 ATGGACCTTGGCGAACCATCATGCATCAGCGTCATAGTAGCCGAGCTGCCCACCCTCCGGGAACTCTTCCGGCTCGAAGATGAAGCACAGAAGGAAGCCACCAGCGACGACAGTATCACGACGGAGTACCAAACGCCTGATGGGACTGATTCTAGTATCGAGCCATCTCGCTCATCGTCTTTCGTGCTCGCATTCAATAATCTCACCTACAGTGTGAAGGTCAGCCAGAAAATGAACTTCTCAACGTTGTTCTCAGCGAAAAACCGTTTCGGAGAACCAGAAACCAAGATTCTTCTGAATGATATCTCCGGCGAGGCTCGCGACGGCGAGATTCTTGCCGTTATGGGAGCTAGTGGTTCTGGGAAATCCACTCTGATTGACGCCTTGGCCAATCGAATAGCTAAAGGAAGCTTGAAAGGGAGCGTAAAATTGAACGGCGAGGCCTTAGAATCGCGACTTCTGAAAGCAATTTCAGCCTATGTAATGCAAGACGACCTTCTCTTTCCGATGCTCACGGTGGAAGAAACTCTGATGTTCGCAGCTGAATTCCGATTACCACACAGACTCTCTAGATCCAAGAAGAAGATGCGAGTACAAGCTCTGATCGACCAGCTCGACCTCAGAAACGCCGCCAAAACTGTCATCGGCAATGAAGGCCACCGCGGTGTATCCGGCGGCGAACGACGCCGTGTGTCCATCGGCATTGATATAATCCACGATCCGATCATATTGTTCCTCGATGAACCTACATCGGGACTGGATTCCACGAGCGCATTCACGGTGGTGAAGGTTTTGCAGACGATCGCGCACACAGGAAGCATCGTTGTGATGGCGATCCACCAACCGAGTTCGAGAATTCTTGGTCTTATCGACAGAATGATCTTCTTATCTCGAGGAGAAATAGTGTTCAGTGGTTCGCCTTTGCAGCTTCCCCTCTTCTTCGCTGAATTTGAACACCCAATTCCAGAAGATGAGAACCAAACCGAGTTTGCATTCGACTTGATTCACGAGCTAGAAGAAGGGTCATCTAGTGGAACTCATAGATTGGTGGAGTTTAACAAGTCGTGGCAGATCAAGAAACAACCAGGAACTAATGATAGCACTGAAGTTGAATATCGCTACCATGGATTATCTTTGAAAGAAGCGATCAGTACAAGCATCTCGAAAGGAAAACTAGTTTCAGGAATCATAAAATCTACTGATAATAATGCAGCAAGATCATCATCATCATCAACTCCTTCAAAGGTTCCGACATTTGCAAACCCATTATTGATTGAAGTGACAAAGCTCTCAATAAGATCATACACCAATTCAAGAAGAACACCTGAAATATTCAGGACACGATTGGCCATAGTACTCATCACAGGCTCACTTCTAGCTTCAGTGTTTTGGCGTTTAGATGATTCTCCAAAAGGGGTCCAAGAAAGGCTTAGCTTCTTCGCTTTCGCCATGTCCTCCACCTTCTACACAACAGCAGAGGCGCTCCCCATGTTCCTTCAAGATCGATACATTTTTATGAGAGAAACTGCTTACAACACTTACCGTAGATCCTCCTATGTCTTCTCTCATGCTCTTGTATCTTTACCTTCGTTACTTGTTCTCTCGTTGACTTTCGCTGCGACAACGTTTTGGGCAGTTGGACTTGATGGAGGATGGTTTGGTTTCTTGTTCTATTTCATCTTCATATTTGCTTCTTTCTGGGCAGGTAACTCATTCGTCACCTTCCTCTCTGGCGTACTACCTCACGTGATGCTGGGTTACACCATAGTGGTGAAGACCTTAGCATATTTCTTGCTGTTCAGTGGATTCTTCATTAACAGAGACAGAATCCCTGTTTATTGGATTTGGTTTCACTACTTGTCTTTGGTGAAATACCCATATGAAGCTGTGATGCAGAACGAGTTTGATGACCCAGTGAGTTGCTTTGTGAAAGGTGTGCAGGTTTTCGATAACACGCCTTTCGGCGAGTTGCCGAGTTCCATGAAACTGAAGCTATTACAGAGCTTGAGTGGCACATTAGGGACGAACATAACGAGATCAACTTGCTTGACGACAGGTACTGATATATTGCAGCAGAATGGGATAACACAGTTAAGCAAGTGGAATTGTTTGTGGGTAACGGTGGCTTGGGGATTTTTGTTTAGGGCTCTGTTTTACTTCTCCTTGTTGCTAGGGAGCAAGAATAAGAGGAGGTAA 2196 0.4595 MDLGEPSCISVIVAELPTLRELFRLEDEAQKEATSDDSITTEYQTPDGTDSSIEPSRSSSFVLAFNNLTYSVKVSQKMNFSTLFSAKNRFGEPETKILLNDISGEARDGEILAVMGASGSGKSTLIDALANRIAKGSLKGSVKLNGEALESRLLKAISAYVMQDDLLFPMLTVEETLMFAAEFRLPHRLSRSKKKMRVQALIDQLDLRNAAKTVIGNEGHRGVSGGERRRVSIGIDIIHDPIILFLDEPTSGLDSTSAFTVVKVLQTIAHTGSIVVMAIHQPSSRILGLIDRMIFLSRGEIVFSGSPLQLPLFFAEFEHPIPEDENQTEFAFDLIHELEEGSSSGTHRLVEFNKSWQIKKQPGTNDSTEVEYRYHGLSLKEAISTSISKGKLVSGIIKSTDNNAARSSSSSTPSKVPTFANPLLIEVTKLSIRSYTNSRRTPEIFRTRLAIVLITGSLLASVFWRLDDSPKGVQERLSFFAFAMSSTFYTTAEALPMFLQDRYIFMRETAYNTYRRSSYVFSHALVSLPSLLVLSLTFAATTFWAVGLDGGWFGFLFYFIFIFASFWAGNSFVTFLSGVLPHVMLGYTIVVKTLAYFLLFSGFFINRDRIPVYWIWFHYLSLVKYPYEAVMQNEFDDPVSCFVKGVQVFDNTPFGELPSSMKLKLLQSLSGTLGTNITRSTCLTTGTDILQQNGITQLSKWNCLWVTVAWGFLFRALFYFSLLLGSKNKRR 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g3257 731 CDD ABCG_EPDR 62 305 - -
Alju01g3257 731 Gene3D - 85 312 IPR027417 -
Alju01g3257 731 SMART AAA_5 108 300 IPR003593 GO:0016887
Alju01g3257 731 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 40 717 - -
Alju01g3257 731 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 78 323 IPR003439 GO:0005524
Alju01g3257 731 FunFam ABC transporter G family member 6 88 314 - -
Alju01g3257 731 ProSitePatterns ABC transporters family signature. 223 237 IPR017871 GO:0005524|GO:0016887
Alju01g3257 731 Pfam ABC-2 type transporter 430 635 IPR013525 GO:0016020|GO:0140359
Alju01g3257 731 MobiDBLite consensus disorder prediction 30 56 - -
Alju01g3257 731 Pfam ABC transporter 99 251 IPR003439 GO:0005524
Alju01g3257 731 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 94 310 IPR027417 -
Alju01g3257 731 MobiDBLite consensus disorder prediction 36 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g3257 Alju-ChrAlju01 58458406 58462457 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g3257 93 300 Calmodulin-binding Proteins AT2G36910 28.000 7.64e-11 63.9