Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g3248 ATGTATTCCAAGTTCCAACAGCCACCAAGTTCCCCAAGAAAAGAAAATGAGTTCCAATTAACCACTGGGGGATCCATGGCCTCGAAAATGGAAATTGAGAATTCTACCGATGCTTCTCCGTCTTCGCCAAAGAATATATACAAAGATCCAGATGACGGCCGGCAGCGATTTTTGCTTGAGCTGGAATTTGTTCAGTGCCTTGCTAATCCCACCTACATTCACTATTTGGCTCAGAATCGATATTTAGAGGATGAAGCATTCATTGGATACTTGAAGTACCTTCAATACTGGCAACGTCCTGAATACATCAAATTTATTATGTATCCTCATTGCTTTTTCTTTCTCGAACTTCTTCAGAATGCAAATTTTCGAAATGCAATGGCGCATCCTGGCAATAAGGAACTTGCGCATAGACAACAATTTTACTTCTGGAAGAACTATAGGAACAATAGGTTAAAACACATTTTACCACGGTCACTCCCTGAATCTAGCGTCACAATTGCACCTCCTGTGGCTGCTTCAACTCCATCTCAGGCGCCGGTGCCTGCTCTGCCACCAGTACCAGCTGCAAATTTTCCAGTGACAGTATCATCTGCTCAGGCTCTTTCTCCGATGCCATATGGTATGCCGCCTGGATCTGCCCTTGCGAAAAATGATATGAGGAATCCTGCACTTGATAGGAGGAAGAGAAAGTAA 696 0.4353 MYSKFQQPPSSPRKENEFQLTTGGSMASKMEIENSTDASPSSPKNIYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYLEDEAFIGYLKYLQYWQRPEYIKFIMYPHCFFFLELLQNANFRNAMAHPGNKELAHRQQFYFWKNYRNNRLKHILPRSLPESSVTIAPPVAASTPSQAPVPALPPVPAANFPVTVSSAQALSPMPYGMPPGSALAKNDMRNPALDRRKRK 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g3248 231 MobiDBLite consensus disorder prediction 1 21 - -
Alju01g3248 231 MobiDBLite consensus disorder prediction 208 231 - -
Alju01g3248 231 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 31 26 231 IPR008831 GO:0003712|GO:0006355|GO:0016592
Alju01g3248 231 Gene3D Mediator of RNA polymerase II, submodule Med31 (Soh1) 42 144 IPR038089 -
Alju01g3248 231 Pfam SOH1 55 147 IPR008831 GO:0003712|GO:0006355|GO:0016592
Alju01g3248 231 FunFam Mediator of RNA polymerase II transcription subunit 31 43 144 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SOH1 Alju01g3248 Med31 2.8e-34 No_clan