Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g3241 ATGGGGAAGCCAAGAAGAACACAGACTCATCTCTGTTTCATGGTACTTCTTGTCTGGTTTTCTTGTTCTTCTTCTGCAAATGCTCTGCTCTCTCCTAAAGGAGTGAACTTTGAAGTTCAAGCTTTGATGGGTATAAAAGCTTCTCTGGTTGATCCTCATGGAGTTTTAGATACTTGGGATGGAGATTCTGTTGATCCTTGTAGCTGGACCATGGTCACTTGTTCTTCTGACAACCTTGTTGTTAGCCTGGGCACTCCAAGTCAAAGTTTATCTGGTACTTTGTCTCCCACCATAGGAAACCTCACAAACCTTCAAACTCTGTTGTTACAGAATAACAACATAACAGGTACAATTCCTTCAGAAATAGGGAAGCTTTCAAAGCTGCAGACTTTAGATCTGTCAAATAACTTGTTCAATGGGGAAATTCCTGCCTCTTTAAGCCACATGAGCAAGCTGCAATACTTGAGGCTCAATAATAATAGTCTTTCTGGTGAATGTCCAGAGTCACTGGCCAACATGACACAGCTTGCTTTCCTTGACTTGTCCTACAACAATCTGAGTGAGCCTGTGCCCAGAATTCTGGCCAAATCATTCAGCCTTGTTGGAAATCCCCTCATCTGTGGTACTGGGAAAGAAGAAACCTGCCATGGGATGACACTTATGCCTATGTCCATGAACTTAAACAATACCCAACAAGATGCTGAACCTTCTGGCAGACAAAAAACACACAAAGTAGCAATTGCCTTTGGTTTGAGCCTAGGATGTCTCTGTCTCATAGTAGTTTGTTTTGGACTATTTCTCTTGTGGAGGCATAAGCATAATGAACAAGCATTCTTTGATGTCAAAGATCGTCATCATGAGGAAGTGTATCTGGGGAACTTGAAGAGGTTCCATTTCAGAGAGCTGCAGATAGCTACAAACAATTTCAGCAACAAGAACATATTAGGAAAAGGCGGGTTCGGACACGTGTACAAGGGAGTTCTTCAAGATGGGACAGTGGTGGCAGTGAAGAGGCTAAGAGATGGGAATGCCATTGGAGGAGAAATACAGTTTCAGACTGAAGTTGAGATGATAAGCTTGGCAGTACACAGAAACCTCCTCAGACTCTATGGTTTCTGTATGACTCCCTCTGAAAGGCTTCTTGTTTACCCTTATATGCCTAATGGCAGTGTTGCTTCTCGCCTCAAAGGAAAACCAGTGTTGGACTGGGGAACAAGGAAGCAGATAGCATTAGGAGCAGCAAGGGGTTTACTATACCTACATGAGCAATGTGATCCAAAGATAATTCATAGGGATGTGAAGGCAGCAAACATATTGCTTGATGAGTACTATGAGGCAGTGGTTGGAGATTTTGGATTGGCAAAGCTTTTGGATCATCAAGACTCTCATGTGACCACTGCTGTGAGGGGCACTGTGGGCCACATTGCCCCTGAGTACCTCTCCACAGGGCAGTCCTCTGAGAAGACTGATGTCTTTGGATTTGGCATTCTCCTCCTTGAGTTGATCACTGGTCTTAGGGCCCTTGACTTTGGAAAAGCTGCCAACCAGAAAGGAGCCATACTTGATTGGGTGAAGAAGATTCATCAAGAGAAGAAGCTTGAGCTACTAGTGGACAAGGATTTGAAGAGCAACTATGACAGAATAGAGCTAGAAGAAATGGTGAAAGTGGCACTTCTTAGTACACAATACCTTCCTGGACAGAGACCTAAAATGTCAGAAGTAGTGAGAATGCTTGAAGGAGATGGACTTGCAGAAAGATGGGAAGCTTCTCAAAGCAAAAATCATAATCATAATGACACAACAACCACAAGCAAATCCAATAACAAACATGCCCATCAATTCTCTTCTTCAGATCGTTATTCTGATCTCACTGATGATTCTTCTTTGTTAGTCCAAGACATGGAGCTTTCAGGTCCAAGGTGA 1923 0.4316 MGKPRRTQTHLCFMVLLVWFSCSSSANALLSPKGVNFEVQALMGIKASLVDPHGVLDTWDGDSVDPCSWTMVTCSSDNLVVSLGTPSQSLSGTLSPTIGNLTNLQTLLLQNNNITGTIPSEIGKLSKLQTLDLSNNLFNGEIPASLSHMSKLQYLRLNNNSLSGECPESLANMTQLAFLDLSYNNLSEPVPRILAKSFSLVGNPLICGTGKEETCHGMTLMPMSMNLNNTQQDAEPSGRQKTHKVAIAFGLSLGCLCLIVVCFGLFLLWRHKHNEQAFFDVKDRHHEEVYLGNLKRFHFRELQIATNNFSNKNILGKGGFGHVYKGVLQDGTVVAVKRLRDGNAIGGEIQFQTEVEMISLAVHRNLLRLYGFCMTPSERLLVYPYMPNGSVASRLKGKPVLDWGTRKQIALGAARGLLYLHEQCDPKIIHRDVKAANILLDEYYEAVVGDFGLAKLLDHQDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGLRALDFGKAANQKGAILDWVKKIHQEKKLELLVDKDLKSNYDRIELEEMVKVALLSTQYLPGQRPKMSEVVRMLEGDGLAERWEASQSKNHNHNDTTTTSKSNNKHAHQFSSSDRYSDLTDDSSLLVQDMELSGPR 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g3241 640 ProSiteProfiles Protein kinase domain profile. 309 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g3241 640 SMART LRR_typ_2 101 124 IPR003591 -
Alju01g3241 640 SMART LRR_typ_2 173 196 IPR003591 -
Alju01g3241 640 SMART LRR_typ_2 125 148 IPR003591 -
Alju01g3241 640 SMART LRR_typ_2 149 172 IPR003591 -
Alju01g3241 640 FunFam Somatic embryogenesis receptor-like kinase 1 386 598 - -
Alju01g3241 640 FunFam Somatic embryogenesis receptor kinase 1 278 385 - -
Alju01g3241 640 Pfam Leucine rich repeat N-terminal domain 38 75 IPR013210 -
Alju01g3241 640 SMART serkin_6 309 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g3241 640 MobiDBLite consensus disorder prediction 594 631 - -
Alju01g3241 640 Gene3D Transferase(Phosphotransferase) domain 1 386 598 - -
Alju01g3241 640 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 13 589 - -
Alju01g3241 640 ProSitePatterns Protein kinases ATP-binding region signature. 315 337 IPR017441 GO:0005524
Alju01g3241 640 ProSitePatterns Serine/Threonine protein kinases active-site signature. 428 440 IPR008271 GO:0004672|GO:0006468
Alju01g3241 640 MobiDBLite consensus disorder prediction 588 640 - -
Alju01g3241 640 SUPERFAMILY Protein kinase-like (PK-like) 286 579 IPR011009 -
Alju01g3241 640 Pfam Protein kinase domain 310 541 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g3241 640 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Alju01g3241 640 Pfam Leucine rich repeat 127 186 IPR001611 GO:0005515
Alju01g3241 640 Gene3D Ribonuclease Inhibitor 35 217 IPR032675 -
Alju01g3241 640 Gene3D Phosphorylase Kinase; domain 1 278 385 - -
Alju01g3241 640 FunFam Putative LRR receptor-like serine/threonine-protein kinase 35 217 - -
Alju01g3241 640 SUPERFAMILY L domain-like 38 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g3241 Alju-ChrAlju01 58094571 58100362 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g3241 7 640 Receptor kinase-like Gene Family AT5G16000 74.882 0.0 965
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Alju01g3241 Pkinase 4e-43 CL0016