Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g3221 ATGGCTTCTCCAAATTCTTCTCCTTCTGCTTTTCCACCCACTTCTGCTGATAATGCCCCATCAAATTCTCTCATATCATCACAACCTCCCACTTCTTCTCTCCCCAGTCAAACCTCTAACAGTCCTGCTCCTTCATCTCCATCTCTTTCTCCTCCACCGGCTACACCGCCGCCATCTTCATCCCCACCCCCGGCATTGCCGCCACCAGCTTCGCCCCCGCCTGAATCATCATTGCCACCACCGGCTTCACCCCCGCCTGAATCATTGCCACCACCGGCTTCTTCAACCCCGCCTCCAGCATTGCCACCACCATCTTTACCATCTACACCAAATTCTCCTCCACCAACTCCTTCAGCATCACCTCCACCATCATCTGCTTCTGCTCCTCCTCCAGCTGAGAAGTCTCCTGCTGCTCCAAATTTATCTCCACCACCTCCAGTAGAAGGTTCTCCTCCTCCACAGGCCTCAAAGGAACCTCCTGCAGCAGATCCACCTCCATCTCGACTCAATTCGCCTCCTCCTCCTCCTCCAAAGAATGTCCCAAAATCACCATCATCCAGGCCACCTCCTCCACCTCTGGGAAAGCCGCCAGAAAGCGCTCCTGTGCTTACACCCCCACCATCTTCTACAGAATCTCCTCCTTCTCCTTCTGCAGATGATCCCCCTCAATCCGCTACACCATCACCTTCTCCTCCTTCAGTTCCAACTACCTCTTCATCTCCACCAACTGTTTCACCTTCTCCTCCAACTAATTCATCAGCAGCTGGGGCCCCAATTGCAGCCCTACCGTCTATTCCAACAGAGAAACCAACTGCAAAACCAACTGATGATACTAGTGTAACTGCAAGTGCCCCACCTACACATTCAAAGGGTCTAAATACAGGAGGAGGTGTGGCTATTGGTGTCATAATTGGTTTTTTTGTCCTTAGCCTTCTTGTTATGGCTGTGTGGCTTGTAAAACGAAAGAGGAAGCAAACAGGATCAAAAGTTGGTTATGCTATGACCTCTCCATTTGGCTCATCTCAGAATTCAGGTACCATATTCTTGAGGCCACAGTCTCCAGCTCCCTATTTTGGAAGCAACTCTGGTAGTGGTATCATGTATTCTCCATCAGAGCCCGGTGGAAGAAGTCAGTCAAGATCATCATTCATGTATGAAGAACTTGTGCACGCAACAAATGGGTTTTCTGCACAAAACCTTTTGGGTGAAGGTGGATTTGGTTGTGTCTACAAAGGCTTGCTCACTGATGGAAGAGAAGTTGCTGTGAAACAGCTCAAAGTTGGTGGAGGACAAGGAGAACGTGAATTTCAAGCAGAAGTGGAGATTATTAGCCGAGTACATCACCGCCATCTGGTTTCCTTGGTGGGTTACTGCATATCAGAGCATCAAAGATTGCTTGTCTATGACTATTTGCCCAACAATACCCTTCATTACCATCTTAATGGTGAAGACAGGCCAGTTTTGGACTGGGCTACCAGAGTCAAGATTGCTGCTGGTTCAGCTCGTGGAATAGCTTACCTACATGAAGACTGCCATCCACGCATTATTCACCGAGACATCAAGTCATCAAACATCCTTCTTGACAACAACTTTGAAGCTCGAGTTTCAGATTTTGGGCTTGCAAAACTAGCCTTGGATACACACACACATGTAACTACTCGCGTAATGGGAACCTTTGGGTATATGGCACCAGAGTATGCAACGAGTGGGAAGTTGACTGAGAAATCTGATGTTTATTCTTTTGGAGTTGTGCTTCTGGAGCTAATTACAGGTCGGAAGCCTGTAGATGCCTCTCAGCCAATTGGTGATGAGAGCCTGGTTGAATGGGCTCGGCCTCTGCTAACTGAAGCACTTAACAACGAAGACTTGGAAATATTGGCGGATCCAAGATTAGAGAAGAACTATAATAGAAATGAAATGTTCCGGATGATCGAGGCAGCTGCAGCTTGTGTACGTCACTCTGCAGCGAAGAGGCCCCGAATGAGTCAGGTTGTGAGAGCTTTAGATTTGTTGGATGAACAAACAGATCTGAACAATGGAATGAAGCCTGGGCAGAGCTCAGTGTTTGATTCTGCAGAGCAAAATGAACAAATCAGAATGTTCAGGAGGCTGGCTTTTGGAAGCCAGGATTACAGTAGCAGTTATTTCAACGAGTCTCATGGTAGCTGGAGAAGTAGAGATCAGGGCCACCACACCACCACTTCCTTTTCCCAAAATAGGTCTGGACCATGGAACGTGTAA 2241 0.4801 MASPNSSPSAFPPTSADNAPSNSLISSQPPTSSLPSQTSNSPAPSSPSLSPPPATPPPSSSPPPALPPPASPPPESSLPPPASPPPESLPPPASSTPPPALPPPSLPSTPNSPPPTPSASPPPSSASAPPPAEKSPAAPNLSPPPPVEGSPPPQASKEPPAADPPPSRLNSPPPPPPKNVPKSPSSRPPPPPLGKPPESAPVLTPPPSSTESPPSPSADDPPQSATPSPSPPSVPTTSSSPPTVSPSPPTNSSAAGAPIAALPSIPTEKPTAKPTDDTSVTASAPPTHSKGLNTGGGVAIGVIIGFFVLSLLVMAVWLVKRKRKQTGSKVGYAMTSPFGSSQNSGTIFLRPQSPAPYFGSNSGSGIMYSPSEPGGRSQSRSSFMYEELVHATNGFSAQNLLGEGGFGCVYKGLLTDGREVAVKQLKVGGGQGEREFQAEVEIISRVHHRHLVSLVGYCISEHQRLLVYDYLPNNTLHYHLNGEDRPVLDWATRVKIAAGSARGIAYLHEDCHPRIIHRDIKSSNILLDNNFEARVSDFGLAKLALDTHTHVTTRVMGTFGYMAPEYATSGKLTEKSDVYSFGVVLLELITGRKPVDASQPIGDESLVEWARPLLTEALNNEDLEILADPRLEKNYNRNEMFRMIEAAAACVRHSAAKRPRMSQVVRALDLLDEQTDLNNGMKPGQSSVFDSAEQNEQIRMFRRLAFGSQDYSSSYFNESHGSWRSRDQGHHTTTSFSQNRSGPWNV 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g3221 746 MobiDBLite consensus disorder prediction 45 248 - -
Alju01g3221 746 ProSiteProfiles Protein kinase domain profile. 395 671 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g3221 746 MobiDBLite consensus disorder prediction 1 294 - -
Alju01g3221 746 Gene3D Transferase(Phosphotransferase) domain 1 471 693 - -
Alju01g3221 746 ProSitePatterns Protein kinases ATP-binding region signature. 401 423 IPR017441 GO:0005524
Alju01g3221 746 SUPERFAMILY Protein kinase-like (PK-like) 374 669 IPR011009 -
Alju01g3221 746 FunFam proline-rich receptor-like protein kinase PERK8 471 683 - -
Alju01g3221 746 Gene3D Phosphorylase Kinase; domain 1 371 470 - -
Alju01g3221 746 ProSitePatterns Serine/Threonine protein kinases active-site signature. 515 527 IPR008271 GO:0004672|GO:0006468
Alju01g3221 746 MobiDBLite consensus disorder prediction 271 290 - -
Alju01g3221 746 Pfam Protein tyrosine and serine/threonine kinase 398 668 IPR001245 GO:0004672|GO:0006468
Alju01g3221 746 MobiDBLite consensus disorder prediction 1 44 - -
Alju01g3221 746 SMART serkin_6 395 671 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g3221 746 FunFam Proline-rich receptor-like protein kinase PERK8 368 470 - -
Alju01g3221 746 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 308 704 IPR047117 -
Alju01g3221 746 MobiDBLite consensus disorder prediction 717 746 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g3221 Alju-ChrAlju01 57733811 57740484 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g3221 268 728 Trihelix Transcription Factor Family AT5G38560 68.922 0.0 671
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Alju01g3221 PK_Tyr_Ser-Thr 3.9e-47 CL0016