Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g3195 ATGGTTCGTGGAACTGATTTAGTTACCTTTGGGGTCTCTGCTGTTTTGGCCTTTGGAATTTTGATAGCTTGTCTCATATTTTTGGTCATAAAGTGGCATAAGAAGCGCGCTCATCTTAGACGTTGTGCAAATGAGCGTAGCGTAACAACACTTCCAATACGCACAAATGGATTAGAAACAAGCACTGAATTTAGTGCTTCTCTTACAAGCTCCATAGCTGCACCAATGTCAGAAAATCTTCATAAAGATTCCCATTTCTCTTGGTGGAAACGTCCAAAGAAAGATCAATTTGCATCCTCATCAGGCACTCTTAGATACTCATTCAAAGATATTCAGAAGGCAACACAAAATTTCACAACTATCTTGGGACAAGGATCATTTGGAACAGTTCATAAAGCAACAATGCCTACTGGTGAGGTGGTAGCTGTGAAGGTGCTCAGTTCTGATTCCAAACAAGGGGAGAAAGAATTCCAAACAGAGGTACTTTTGCTCGGAAGACTGCATCATCGGAATCTTGTAAATTTGTTAGGATATTGTGTAGATAAAGGACAACGTATTTTGATTTATGAGTTTATGAGCAATGGAAGTCTAGAAAGGCTTATACATGGTGAAGAAGAGGTGTTAAGTTGGGATGAAAGGCTGCAAATTTCTGTTGATATTTCACATGGAATTGAGTACCTTCATGAAGGAGCAGTCCCGCCCGTCATACACCGTGATTTGAAATCTGCCAATATATTGTTAGATCACTCAATGCGAGCCAAGGTGGCTGATTTTGGGCTCTCAAAGGAGGAAATCTTTGATGGGCGAAAATCTGGCTTGAAAGGTACATATGGGTACATGGATCCATCATACATCTCCACTGCCAAGTTCACAATGAAAAGTGACATTTACAGTTTCGGCATCATCATTTTCGAGCTCATCACTGCCATTCACCCCCAACAGAATTTGATGGAATACATTAACCTTGCTGCAATGGATCATGATGGTGTAGATGGAATACTTGACAAGAAACTGGTGGGAAAATGCAACATTGAAGAAGTGAGGAAGCTTGCTAAGATTGGACACAAGTGCTTACACAAATCACCCAAGAAACGTCCTTCAATTGGTGAGGTTTCACAGGCTGTATCCAGCATCAGACAGAGACCCCTTTTAAAAGAAAACACCATGTCTTTTGCTGGCTCGAGCTTTTCCAGAGCTTTGAGTCGAATTGAGGATCAACAGGTTGAGTTAAGTAGGATGGCCACCATGGCCCACTAG 1257 0.4145 MVRGTDLVTFGVSAVLAFGILIACLIFLVIKWHKKRAHLRRCANERSVTTLPIRTNGLETSTEFSASLTSSIAAPMSENLHKDSHFSWWKRPKKDQFASSSGTLRYSFKDIQKATQNFTTILGQGSFGTVHKATMPTGEVVAVKVLSSDSKQGEKEFQTEVLLLGRLHHRNLVNLLGYCVDKGQRILIYEFMSNGSLERLIHGEEEVLSWDERLQISVDISHGIEYLHEGAVPPVIHRDLKSANILLDHSMRAKVADFGLSKEEIFDGRKSGLKGTYGYMDPSYISTAKFTMKSDIYSFGIIIFELITAIHPQQNLMEYINLAAMDHDGVDGILDKKLVGKCNIEEVRKLAKIGHKCLHKSPKKRPSIGEVSQAVSSIRQRPLLKENTMSFAGSSFSRALSRIEDQQVELSRMATMAH 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g3195 418 SMART serkin_6 116 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g3195 418 ProSiteProfiles Protein kinase domain profile. 116 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g3195 418 FunFam Calcium/calmodulin-regulated receptor-like kinase 2 192 399 - -
Alju01g3195 418 Gene3D Phosphorylase Kinase; domain 1 82 191 - -
Alju01g3195 418 SUPERFAMILY Protein kinase-like (PK-like) 91 373 IPR011009 -
Alju01g3195 418 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 24 - -
Alju01g3195 418 ProSitePatterns Protein kinases ATP-binding region signature. 122 144 IPR017441 GO:0005524
Alju01g3195 418 PIRSF TyrPK_CSF1-R 194 414 - -
Alju01g3195 418 PIRSF TyrPK_CSF1-R 5 39 - -
Alju01g3195 418 PIRSF TyrPK_CSF1-R 112 202 - -
Alju01g3195 418 CDD STKc_IRAK 122 373 - -
Alju01g3195 418 Gene3D Transferase(Phosphotransferase) domain 1 192 393 - -
Alju01g3195 418 ProSitePatterns Serine/Threonine protein kinases active-site signature. 235 247 IPR008271 GO:0004672|GO:0006468
Alju01g3195 418 FunFam serine/threonine-protein kinase PBS1-like 88 191 - -
Alju01g3195 418 Pfam Protein tyrosine and serine/threonine kinase 118 373 IPR001245 GO:0004672|GO:0006468
Alju01g3195 418 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 16 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g3195 Alju-ChrAlju01 57103125 57106725 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g3195 107 380 Receptor kinase-like Gene Family AT4G02010 40.273 3.05e-69 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-2 Alju01g3195 PK_Tyr_Ser-Thr 1.4e-49 CL0016