Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g3169 ATGGCCAGCAAAATAAGACGTGTTTCTTCAATAATTCCGGTGGCCGTTGTGACGGTCCTCTTCGCCGCCACGGCGGTGTTATGTAACGACAACGTGCCGATCCCGGCAGACAGAGGCCAATTGAACCAATGGTTCTCACAGAACGTGCGGCCATTATCCGTCCGGAAGACAACTCTGGACCCCACCCTGCTGGCCGCCGAAGCCTCTCCGAGGATAATTACGGTCTCGAAGGTCGGGAAAGCCGACTTCAGGACGATAACCGACGCGATTAACAGCGTGCCGATGAATAACAAGCGGCGAGTGGTAATCAAAATCGCCGGCGGAGAATACAGAGAAAAGATCACCATTGAGAGGACCAAGGATTTCATCACTCTCCTTGGTAATCCTACAAACAAGCCCAAGTTGATTTATAATGGAACCGCCAAACAATACGGCACCGTTGATAGTGCTACGTTCATTACCTACAGCAATTACTTCGTCGCTTCAAATATCATTTTCTCGAATTCGGCCCCAATGCCGGACGGGCGCATGGAAGGAGCTCAGGCGGTGGCGGTCCGAGTGTCGGGTGACAAGTCGGCATTCTATAACTGCGTGTTTTTAGGGTTTCAGGACACACTATGCGACGACAAGGGGAACCATTTGTTCAAGGATTGCATAATCCAAGGCACGGTGGACTTCATATTTGGGAGCGGCAAGTCGTTGTATTTGAACACAAAGCTCGTGGTGGTGGGGAAAGTCGGAGGTGTGATCGTGGCTCAGGCGAGAGAGACCAACGATGACACCATAGGGTACTCCTTCGTTCACTGCGATATAAGTGGCACGGCCAGTGGTTCCTTCTTGGGAAGAGCTTGGATGTCTCATGGCAAAGTTGTGTATTCTTATACTTCCATGAATAACGTTATTACCCCTCAAGGCTGGAACATTAACAACCATCCCGGTATGACTCGAAGTGTATATTTTGGAGAGTTCCAGAATAGTGGAAGTGGTGCAAATACCAAGGGACGTGCCCCATTCACAAAGTTACTAAGTGCCAATGATGCTAAGCAATTCCTCACTCTTGGCTTCATTCAAGCTTCTAAGTGGTTGCTTCCTCCTCCTCAATATGCCTAA 1110 0.4955 MASKIRRVSSIIPVAVVTVLFAATAVLCNDNVPIPADRGQLNQWFSQNVRPLSVRKTTLDPTLLAAEASPRIITVSKVGKADFRTITDAINSVPMNNKRRVVIKIAGGEYREKITIERTKDFITLLGNPTNKPKLIYNGTAKQYGTVDSATFITYSNYFVASNIIFSNSAPMPDGRMEGAQAVAVRVSGDKSAFYNCVFLGFQDTLCDDKGNHLFKDCIIQGTVDFIFGSGKSLYLNTKLVVVGKVGGVIVAQARETNDDTIGYSFVHCDISGTASGSFLGRAWMSHGKVVYSYTSMNNVITPQGWNINNHPGMTRSVYFGEFQNSGSGANTKGRAPFTKLLSANDAKQFLTLGFIQASKWLLPPPQYA 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g3169 369 ProSitePatterns Pectinesterase signature 2. 220 229 IPR033131 -
Alju01g3169 369 Gene3D - 71 365 IPR012334 -
Alju01g3169 369 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 65 362 - -
Alju01g3169 369 FunFam Pectinesterase 68 364 - -
Alju01g3169 369 Pfam Pectinesterase 73 358 IPR000070 GO:0030599|GO:0042545
Alju01g3169 369 SUPERFAMILY Pectin lyase-like 67 362 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g3169 Alju-ChrAlju01 56454451 56457972 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g3169 19 366 Carbohydrate Esterase AT1G69940 54.598 1.66e-144 412