Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g3153 ATGCCGGAGATGGCGGTCAATGCTTCAGCTAATTCCAACGGCGGTGTTAATGGTGGTCATCAGTTCGGCGACACCACGCTCACCAAGGTTTTTGTTGGTGGATTGGCTTGGGAGACTCCCAAGGACGCTATGAGAGAGCATTTTCAGAAGTACGGCGAGATCCTCGAGGCCGTCATTATCTCCGATAAGGCCACCGGCAGATCCAAGGGCTATGGCTTCGTGACCTTTAAGGAAGCTGAAGCAGCAAAGAAGGCTTGTGAGGATCCTACGCCGATCATCAATGGCCGCCGAGCCAACTGCAATCTGGCTTCGCTAGGCGCGCGACGCCCTAGGTCCACAAACACTTCACCGCCTCGTCAACAAGGATCAAACGGCGGAGGACCAAGGAACGCCCAAAGCGCACCACCACTGCCAGCCAATCACGCCCCGTGGTATTATCCAGTGGGGACCCCTGCTTCCCATTTTCATCATCACCACCACCACCAACCTGTTCCTCTATACGGGTACACCCCAACGTACATTCCAACTGATATAAATTACAATCAGAAGCTAAGCTACACTGGCGGTGGGCCCTACATGAATGGTTACTACTCTCCAATGTACCCGAGCCAGGCTATGGTGGGTGGGAACACATTGATGCCGATGTACCCTCTTTATCAGTACCATCAAACTCACACGATGGGCCTCCCTGCCCACATCTTCCAGCCAACCACAGCGGGGCACGTGGCAATCATGTCGAAGCCCGCGTCCATCACTCCGAACACAGGTGTGGTTGGGAGAGGTGAAGGCTTGAAAAAGACTGATCTGAATATTGTTGATCTCAGGAAGTGA 831 0.5367 MPEMAVNASANSNGGVNGGHQFGDTTLTKVFVGGLAWETPKDAMREHFQKYGEILEAVIISDKATGRSKGYGFVTFKEAEAAKKACEDPTPIINGRRANCNLASLGARRPRSTNTSPPRQQGSNGGGPRNAQSAPPLPANHAPWYYPVGTPASHFHHHHHHQPVPLYGYTPTYIPTDINYNQKLSYTGGGPYMNGYYSPMYPSQAMVGGNTLMPMYPLYQYHQTHTMGLPAHIFQPTTAGHVAIMSKPASITPNTGVVGRGEGLKKTDLNIVDLRK 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g3153 276 MobiDBLite consensus disorder prediction 106 130 - -
Alju01g3153 276 MobiDBLite consensus disorder prediction 105 136 - -
Alju01g3153 276 FunFam Putative RNA-binding protein ARP1 22 111 - -
Alju01g3153 276 SMART rrm1_1 29 101 IPR000504 GO:0003723
Alju01g3153 276 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 28 105 IPR000504 GO:0003723
Alju01g3153 276 PANTHER BOULE-RELATED 7 238 - -
Alju01g3153 276 Gene3D - 22 134 IPR012677 -
Alju01g3153 276 CDD RRM_RBM24_RBM38_like 28 103 - -
Alju01g3153 276 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 30 87 IPR000504 GO:0003723
Alju01g3153 276 SUPERFAMILY RNA-binding domain, RBD 25 130 IPR035979 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g3153 Alju-ChrAlju01 56140138 56143214 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g3153 24 104 C2H2 Transcription Factor Family AT2G19380 41.975 7.30e-16 75.5