Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g3124 ATGATCATGTTTTCCTCAAAACTACTGGGCTTTCTGCTTCTTCCTTGCTTCTTCTTCTCCGCCGTTACAATGCTTAGTATTTCACCAGGTTCTACCCTTTTTGCTTCTGATACAAACCAAACATGGCCTTCTCCCAGCAACGCTTTCTCTCTCCGCTTTCTTCCTTCTCAAACCCAGACCACTTCTCCTCCCTCCTTCGTTGCCGCCGTCGTCTTCTCCGGCGGCACACCCGTTGTTTGGTCCGCCGGTAACGGCGTCGCCGTGGATTCCCGTGGCTCGCTTCAGTTTCTCTCCTCTGGCGTTCTTCGTCTCGTTAACGGCTCCGGCTTCGCCATTTGGGACTCCGGTACTTCCAATTTGGGCGTCTCTTCTGCCTCCCTGAACGACGACGGAAACCTTATTCTCTCCAATCGAACCGGCGTCGTTTGGTCGAGCTTCGACCATCCCACTGACACCATCCTGCCTTCTCAGAATTTCACAACCCGTATGGTTTTGCGATCTGGTGAGTATTCATTTGTAGTTACTAACTCAGGTAACCTCATTCTTAGGTGGAGTGATAGTGTACCGTACTGGGATCGTGGTCCAAATTCATCTGTAAATGTCAATTTAACTTTGCCGGTTTTAGGATTACAATCCATAGGGATTTTGAGACTTTCCGATCCGAAATTGGTCACTCCTTTGGATATTGCTTATAGCAGTGATTATGCTGAAGCGAATGGCACTCTGAGAATTCTGAAGTTGGATAGTGATGGGAACTTGAGAATGTACAGTACCTCTAGAGGTGGTGGAATTTCTACTGTAAGATGGGTAGCTGTTGAAGATCAATGTAAGGTTTTTGGGTATTGTGGGAACTATGGGGTATGTAGTTACAAGGATTCAAACCCAATTTGTGGATGCCCATCTGAGAATTTTGAGATGATTGATCCTAATGATAGTAGAAAAGGATGTAGGAGGAAGGTGAGGCTTGAGGATTGTCCAGGCAGGGCTGCTATGTTACAATTGGATCATGCTCTGGTATTGACTTATCCTCCAATATTTGTGGTTAACCCAGAGGTATTTTTCATTGGTATATCAGCTTGCAGTGGAAATTGCCTTGCAGCTACTTCTTGCTTTGCTTCTACTTCATTATCAGATGGCACAGGTCTCTGTTACATAAAGACATCTAGTTTCATCAGCTCCTACCACAATCCATCTCTGCCCAGCACTTCATATGTTAAGGTTTGTGGACCAGTGGTGCCAAACCCGCCACTGAGTTTGGAGGAAGCCGGGAAGGGAAAGGATTGGGAGATACATGCTTGGATAGTAGTGGTAGTTGTTCTTGGTACCCTTTTCGCTTTGATTGTCTTTGAGGGTGGAATATTGATGTGGTGTTGTAAACATGATTCGAGGTTTCGTGGATTCTCTACTCATTATGCTCTTCTTGAGTATGCTTCTGGGGCACCAGTTCAGTTCTCATACAAGGAGCTTCATAGCTCAACAAAAGGGTTCAAAGAGAAGCTTGGTGATGGCGGATTTGGCGCTGTTTACAGAGGAACTCTAGCGAACAAAACCGCTGTTGCGGTGAAACAACTCGAGGGAATTGAGCAAGGTGAGAAACAGTTCAGAATGGAGGTTGCTACTATAAGCAGCACCCACCACCTGAACTTGGTGAGGCTGATTGGGTTTTGTTCTGAAGGCAAACATAGGCTTTTGGTTTATGAGTTCATGAAAAATGGGTCTCTTGAAAATTTTCTTTTTGTCAATGAACAAAACCAGTCTGAGAAATTGTTGAATTGGGAGTATCGGTTCAGAATCGCACTGGGAACTGCAAGGGGAATCACATACCTTCATGAGGAGTGTAGAAACTGCATTGTCCACTGTGATATAAAACCCGAAAACATTCTCATAGATGAGAATTTCAATGCCAAAGTCTCAGATTTTGGCCTCGCGAAACTCACAAGTGGTACAGACCAAAGGTACAGAAGTTTGAAAAGTGTAAGAGGGACTAGGGGATATCTAGCTCCGGAATGGCTTGCAAATCTTCCTGTAACTTCTAAATCTGATGTGTATAGTTTTGGTATGGTTTTGTTGGAGATAGTGAGTGGAAGAAGGAATTTTGGAGTCTCGGAAGGAACAAAGCAGACAAAGTTCTCCATGTGGGCTTATGAAGAGTTCCTGAAGGGTAAGCTGAAGGGAATTCTGGATAGAAGACTGGTTAACCATGAAGTTGATATGGAGGAAGTGAAAAGGGCTATAATGGTGAGTTTCTGGTGCATCCAAGAGCAGCCATATCAGAGGCCAAAAATGAGCAAAGTGGTGCAGATGTTAGAAGGAATCACTGAGATTGAGATGCCACCAGCCCCTAAATCTGTGGGAGAAGGATGTGTTATTGCACACTCCATTGTGGCTGAGGAAGCTCCAATCTTCTTGTCATCTTCCTCATCACAAATCATATAA 2436 0.447 MIMFSSKLLGFLLLPCFFFSAVTMLSISPGSTLFASDTNQTWPSPSNAFSLRFLPSQTQTTSPPSFVAAVVFSGGTPVVWSAGNGVAVDSRGSLQFLSSGVLRLVNGSGFAIWDSGTSNLGVSSASLNDDGNLILSNRTGVVWSSFDHPTDTILPSQNFTTRMVLRSGEYSFVVTNSGNLILRWSDSVPYWDRGPNSSVNVNLTLPVLGLQSIGILRLSDPKLVTPLDIAYSSDYAEANGTLRILKLDSDGNLRMYSTSRGGGISTVRWVAVEDQCKVFGYCGNYGVCSYKDSNPICGCPSENFEMIDPNDSRKGCRRKVRLEDCPGRAAMLQLDHALVLTYPPIFVVNPEVFFIGISACSGNCLAATSCFASTSLSDGTGLCYIKTSSFISSYHNPSLPSTSYVKVCGPVVPNPPLSLEEAGKGKDWEIHAWIVVVVVLGTLFALIVFEGGILMWCCKHDSRFRGFSTHYALLEYASGAPVQFSYKELHSSTKGFKEKLGDGGFGAVYRGTLANKTAVAVKQLEGIEQGEKQFRMEVATISSTHHLNLVRLIGFCSEGKHRLLVYEFMKNGSLENFLFVNEQNQSEKLLNWEYRFRIALGTARGITYLHEECRNCIVHCDIKPENILIDENFNAKVSDFGLAKLTSGTDQRYRSLKSVRGTRGYLAPEWLANLPVTSKSDVYSFGMVLLEIVSGRRNFGVSEGTKQTKFSMWAYEEFLKGKLKGILDRRLVNHEVDMEEVKRAIMVSFWCIQEQPYQRPKMSKVVQMLEGITEIEMPPAPKSVGEGCVIAHSIVAEEAPIFLSSSSSQII 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g3124 811 CDD STKc_IRAK 500 772 - -
Alju01g3124 811 SUPERFAMILY Protein kinase-like (PK-like) 477 770 IPR011009 -
Alju01g3124 811 Pfam Protein kinase domain 497 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g3124 811 ProSitePatterns Serine/Threonine protein kinases active-site signature. 617 629 IPR008271 GO:0004672|GO:0006468
Alju01g3124 811 Gene3D - 148 269 IPR036426 -
Alju01g3124 811 Gene3D - 25 147 IPR036426 -
Alju01g3124 811 ProSitePatterns Protein kinases ATP-binding region signature. 500 522 IPR017441 GO:0005524
Alju01g3124 811 ProSiteProfiles Bulb-type lectin domain profile. 24 148 IPR001480 -
Alju01g3124 811 Gene3D Transferase(Phosphotransferase) domain 1 569 780 - -
Alju01g3124 811 Pfam D-mannose binding lectin 78 163 IPR001480 -
Alju01g3124 811 PIRSF SRK 1 796 IPR024171 GO:0004674
Alju01g3124 811 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 23 148 - -
Alju01g3124 811 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 196 IPR036426 -
Alju01g3124 811 Pfam S-locus glycoprotein domain 237 300 IPR000858 GO:0048544
Alju01g3124 811 SMART blect_4 33 149 IPR001480 -
Alju01g3124 811 FunFam S-receptor-like serine/threonine-protein kinase 468 568 - -
Alju01g3124 811 ProSiteProfiles Protein kinase domain profile. 494 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g3124 811 SMART serkin_6 494 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g3124 811 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 149 271 - -
Alju01g3124 811 PANTHER OS07G0415500 PROTEIN 5 781 - -
Alju01g3124 811 Gene3D Phosphorylase Kinase; domain 1 463 568 - -
Alju01g3124 811 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 569 779 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g3124 Alju-ChrAlju01 55190046 55192481 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g3124 462 779 Receptor kinase-like Gene Family AT5G20050 41.317 5.53e-79 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Alju01g3124 Pkinase 1e-50 CL0016