Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g3119 ATGGAGAATGCAATATTTCTCCTTTCATCGAATATTGCCGAACAGATTTCGCCATTAATGGGTAGCACCAACAAGTCTATCCAAGAAGAAGAAGAAGAAGAAGAAGAAGTGCAAATAGAGAAAGCTCCACACCAAGAAAATGGCCCTTCAATTATCAAACCAACAATCTCTGAGTTCAGTGGGGTGCACACTGATGAAAAGTTGGCTCATGTAATTGCTCGCTATGTGGATACTGTAACTCACTTAAAAGATCGTTGCTTGGGGTATCCTACTAATCAAGATTTGAACTACGAGGCATTAATGCAATTGATGTGTTTTCGATTAAACAATGCTGGTGATCCATTTATTGGGAGTAGCTACATGCTTAATTCGTATCAGTTTGAGCTGTGTGTATTAGATTGGTTTGCCGAACTTTGGGAAATCGAGAAGAATGAATACTGGGGATATGTTACTAATGGCGGAACTGAAGGAAATCTTTATGCCATCTTTGTGGGGAGGGAGCTATATCCAGATGGAATTTTGTACACATCAAAAGAATCTCATTATTCATTGTTCAAGGTAGCTAGAGTAGCTAGAGTCAAGTGTGTGGTTGTTGGGACTAGACCCTCTGGTGAGATTGACTATGATGAATTGAAGGCTTCACTTCTTGCTCACAAAGACAAGCCAGCCATCATCAATCTAAACATGGGAACAACTATGAAAGGAGGTATTGATGACCTTGATCTAGTACTACAGTTACTTGAGAACTGTGGCTTCACACAAGATCGATTCTATATTCACTGCGATGCCGCTTTATTTGGAGTGATGCTCCCATTTATTAACGGGGCACCAAAGATTTCTTTCAAGAAGCCTATTGGAAGTGTAACTGTGTCAGGCCATAAATTTCTCGGATGCCCAATCCCATGTGGTGTTCTAATAACTCGTTTAAATTATGTTGACGTTCTTTCTAAAGAAGTAGAATACATCGCTTCGAGAGACACCACCATCTCAGGAAGCCGAGGAGGCCATACTTCAATCTTCCTCTGGTATGCTCTCAACAAGAGAGGCTTCAATGGCCTTCAACAAGATGTTAATGAGTGCGTTGAAAAAGCAATCTATCTTCATAATCGCTTGAGGGACCACGGAATTGGAGCTATGCGCAACAAGTTTAGCAATATCGTAGTGTTCGAGAGGCCTCTCGATAATGCATTTGCTCGTAGGTGGATATTGGCTAACAAAGGGAATCTATCACACGTGGTGGTGCTACAGCACGTGACTATGGAAATGTTAAATTTATTTGTGAGAGAGTTTGTAGAGAATCGATCCATTTGGTACCAAGATAATAATGGAGGCACAAAAGCTCCCTGTTTTGCTGAGGATATTGGTGCTAAGAACTGTGCTTGTTCTTTCCACAAGAAGCTGATCTCGTGA 1410 0.4106 MENAIFLLSSNIAEQISPLMGSTNKSIQEEEEEEEEVQIEKAPHQENGPSIIKPTISEFSGVHTDEKLAHVIARYVDTVTHLKDRCLGYPTNQDLNYEALMQLMCFRLNNAGDPFIGSSYMLNSYQFELCVLDWFAELWEIEKNEYWGYVTNGGTEGNLYAIFVGRELYPDGILYTSKESHYSLFKVARVARVKCVVVGTRPSGEIDYDELKASLLAHKDKPAIINLNMGTTMKGGIDDLDLVLQLLENCGFTQDRFYIHCDAALFGVMLPFINGAPKISFKKPIGSVTVSGHKFLGCPIPCGVLITRLNYVDVLSKEVEYIASRDTTISGSRGGHTSIFLWYALNKRGFNGLQQDVNECVEKAIYLHNRLRDHGIGAMRNKFSNIVVFERPLDNAFARRWILANKGNLSHVVVLQHVTMEMLNLFVREFVENRSIWYQDNNGGTKAPCFAEDIGAKNCACSFHKKLIS 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g3119 469 Pfam Pyridoxal-dependent decarboxylase conserved domain 127 374 IPR002129 GO:0016830|GO:0019752|GO:0030170
Alju01g3119 469 SUPERFAMILY PLP-dependent transferases 51 432 IPR015424 -
Alju01g3119 469 Gene3D - 121 334 IPR015421 GO:0003824
Alju01g3119 469 ProSitePatterns DDC / GAD / HDC / TyrDC pyridoxal-phosphate attachment site. 287 308 IPR021115 GO:0016831
Alju01g3119 469 Coils Coil 20 40 - -
Alju01g3119 469 PANTHER - 29 465 - -
Alju01g3119 469 Gene3D Aspartate Aminotransferase, domain 1 339 434 IPR015422 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g3119 Alju-ChrAlju01 55087861 55091158 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g3119 229 375 Calmodulin-binding Proteins AT2G02010 29.412 3.12e-08 53.9