Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g3084 ATGACATTGTCTAGACTTTGGGCAGGAAGAAAAGAGAATTGTTCGAGATTGAGAGAATACTTGGTTGTGGTTTTGAATTTTGATCTTCCGAATAGTCGTATTTGGAAGTTTGCGATGGAAGTTCTGAGAGCTATGAAAGGCCATATCTTTGAATTATTCTTTTCAAGCTCTTCAGTTGCCATTGGGCCTTATTGTATTTTTCATATCCACCGGGGTGCCATTGACAGGTGTTTGGGGAAGGATCGTAACATTACCTACAATTCTCGGGCAGTTGGGGTGAAAAAGACACTGGTTTTCTATAGAGGTAGAGCACCACATGGTGAGCGAACTGATTGGGTTATGCACGAGTACACGTTGGAAGAAGAAGAGCTTGCTAGATGCCAGGATTGTAAGGTTGCTGCTGAAGAAACAGAGAGTGTGGTGGTGGATCAAATTTCTAATGAGGCGGCATTTGCTGAGCCAATCAAAATGTTTCATTCAAGCGATCACTACTATGACCCTACCCAATCAGTTATCTCTCACGCGCATGTTTGTGAAGCACCTGAAGTCACCTCTGGTCCCAGTGTTCAAGTAGTGGAGCCTCTCCTTCACGAGGATGACTTCTTGGAAATGAATGATCTCATTGATCCTGAACCAGCACTTCCCAGAATAGAAAATCCTTTGGAGAACTTGGAGTTTGAAGATGGTTTAAGTGCACTTGATTTGTACCATGATGCAGAGATGTTTCTTCGTGACATGGGGCATATTGACCAGGGAACTGCTTCACATCCTCATATGAATACTTTTGACACTAATGTTGTGAATCAGCATTATCAGTCTCTGCCCCCTGGAGACAATGAAGATCCAAGTGAACTCTGGATGCGTCATGAAAGGCAGATCATGAGTTCAGCAGAACATGCTAATGTTTCTTACTCTTCATCAACCTCAGGTACACTCACCGGCACCACTAACAGTGTTGGTGGTTTAGCTCAACCTCCAAATAATGATTTTACTATCTTTGTTTTGATTGCAAGCTTCACATCTCATTTGTGCTGA 1035 0.428 MTLSRLWAGRKENCSRLREYLVVVLNFDLPNSRIWKFAMEVLRAMKGHIFELFFSSSSVAIGPYCIFHIHRGAIDRCLGKDRNITYNSRAVGVKKTLVFYRGRAPHGERTDWVMHEYTLEEEELARCQDCKVAAEETESVVVDQISNEAAFAEPIKMFHSSDHYYDPTQSVISHAHVCEAPEVTSGPSVQVVEPLLHEDDFLEMNDLIDPEPALPRIENPLENLEFEDGLSALDLYHDAEMFLRDMGHIDQGTASHPHMNTFDTNVVNQHYQSLPPGDNEDPSELWMRHERQIMSSAEHANVSYSSSTSGTLTGTTNSVGGLAQPPNNDFTIFVLIASFTSHLC 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g3084 344 Pfam No apical meristem (NAM) protein 79 119 IPR003441 GO:0003677|GO:0006355
Alju01g3084 344 Gene3D NAC domain 76 150 IPR036093 GO:0003677|GO:0006355
Alju01g3084 344 ProSiteProfiles NAC domain profile. 1 148 IPR003441 GO:0003677|GO:0006355
Alju01g3084 344 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 79 255 - -
Alju01g3084 344 SUPERFAMILY NAC domain 77 125 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g3084 Alju-ChrAlju01 52948156 52952046 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g3084 76 131 NAC Transcription Factor Family AT1G34180 75.000 8.94e-24 99.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Alju01g3084 NAM 9.4e-08 No_clan