Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g3080 ATGACGGTGGCGGCGGATTCTTCTCCAGAGTCTTTCAGCCAGATGATGGCTTCCATGCCGGGGTTCCGATTCCATCCTACCGATGAGGAACTAGTCATGTACTATCTTAAGAGGAAGATGTGTAGGAAGAGGCTGAAGCTCGATGTAATTCGTGAAACTGATGTCTACAAGTGGGATCCTGAGGAATTGCCTGGGCAGTCAGTGCTAAAAACCGGTGATAGACAATGGTTCTTTTTCAGTCCTAGAGACAGAAAGTATCCTAATAGTGGTAGGACCAATCGAGCAACAAGACATGGGTACTGGAAAGCAACAGGGAAGGATCGTAACATTACCTACAGTTCTCGGGCAGTTGGGATGAAAAAGACGCTGGTTTTCTACAGAGGTAGAGCACCACATGGTGAGCGAACTGATTGGGTTATGCATGAGTACACGTTGGAAGAAGAAGAGCTTGCTAGATGCCAGGATTGTAAGGACTATTATGCACTTTACAAGGTGTTCAAGAAAAGCGGACCGGGTCCTAAAAATGGTGAACAGTATGGTGCACCATTTAAAGAAGAAGAATGGGTAGATGATGACTTTGTAGATTTTAATGTTAATTCAGCTGGCAAGGAGGCTCCAATTTCACTAGTCAATGAGGGTACTTCTGTTGATACTGTGACTTTTAATGGCCAAGAACAGCCTTTGTTTGATGATGAACTTAATGAGATTTTGAAAAAAATGATGGATGAGCAGATTCCTGACCTGCCCCCCCTGTGTCCTTCTGTACCTCAGGTTGCTGCTGAAGAAACAGAGAGTGTGGTGGTGGATCAAATTTCTAATGAGGCGGCATTTGCTGAGCCAGTCAAAATGTTTCATTCAAGCGATCACTACTATGACGCTACCCAATCAGTTATCTCTCACGTGCATGTTTGTGAAGCACCTGAAGTCACCTCTGGTCCCAGTGTTCAAGTGGAGGAGCCTCTCCTTCACGAGGATGACTTCTTGGAAATGAATGATCTCATTGACCCTGAACCAGCACTGCCCAGAATAGAAAATCCTTTGGAGAACTTAGAGTTTGAAGATGGTTTAAGTGCACTTGATTTGTACCATGATGCAGAGATGTTTCTTCGTGACATGGGGCATATTGACCAGGGAACTGCTTCACATCCTCATATGATTACTTTTGACACTAATGTTGTGAATCAGCATTATCAGTCTCTGCCCCCTGGAGACAATGAAGATCCAAGTGAACTCTGGATGCGTCATGAAAGGCAGATCATGAGTTCAGTGGAACATGCTAATGTTTCTTACTCTTCATCAACCTCAGGTGTGGGTTATGAATCTGCCACCTTGCCTTCCGAAGGTAATCATGATCAAAGTAGCAGTGTGAGAGAAGTTCCTACAAGTAGATTGTCTTCTGCTCTCTGGGCCTTCCTTGAGTCAATACCTACCACTCCTGCATCGGCTGCTGAAAATGCAAATCGGGCTCTTGAGCGGGTGTCTAGCTTTAGTAGGGTGAGGGATAATGTGAAGCAGGCAAGCATAGCCGCCACCGCCGTTGCTAATGAAACTGCAGTTGTGAAGAGAGCAGGTAAAGGAAGGGGAATCTTCTTCTTCTTGCCAGTTCTTGTTGCTTTATGTGCTTTTTTATGGGTTTCTATGGGAACATTGAGACTACTTGGGAGATTCACTCCTTGA 1677 0.4496 MTVAADSSPESFSQMMASMPGFRFHPTDEELVMYYLKRKMCRKRLKLDVIRETDVYKWDPEELPGQSVLKTGDRQWFFFSPRDRKYPNSGRTNRATRHGYWKATGKDRNITYSSRAVGMKKTLVFYRGRAPHGERTDWVMHEYTLEEEELARCQDCKDYYALYKVFKKSGPGPKNGEQYGAPFKEEEWVDDDFVDFNVNSAGKEAPISLVNEGTSVDTVTFNGQEQPLFDDELNEILKKMMDEQIPDLPPLCPSVPQVAAEETESVVVDQISNEAAFAEPVKMFHSSDHYYDATQSVISHVHVCEAPEVTSGPSVQVEEPLLHEDDFLEMNDLIDPEPALPRIENPLENLEFEDGLSALDLYHDAEMFLRDMGHIDQGTASHPHMITFDTNVVNQHYQSLPPGDNEDPSELWMRHERQIMSSVEHANVSYSSSTSGVGYESATLPSEGNHDQSSSVREVPTSRLSSALWAFLESIPTTPASAAENANRALERVSSFSRVRDNVKQASIAATAVANETAVVKRAGKGRGIFFFLPVLVALCAFLWVSMGTLRLLGRFTP 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g3080 558 FunFam Nac domain-containing protein 86 27 171 - -
Alju01g3080 558 Pfam No apical meristem (NAM) protein 20 145 IPR003441 GO:0003677|GO:0006355
Alju01g3080 558 Gene3D NAC domain 27 170 IPR036093 GO:0003677|GO:0006355
Alju01g3080 558 ProSiteProfiles NAC domain profile. 18 168 IPR003441 GO:0003677|GO:0006355
Alju01g3080 558 SUPERFAMILY NAC domain 14 168 IPR036093 GO:0003677|GO:0006355
Alju01g3080 558 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 18 260 - -
Alju01g3080 558 MobiDBLite consensus disorder prediction 432 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g3080 Alju-ChrAlju01 52880966 52884583 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g3080 5 555 NAC Transcription Factor Family AT1G34190 44.898 4.38e-147 433
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Alju01g3080 NAM 1.2e-36 No_clan