Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g3014 ATGGGCTCGCACCAGGTTAAGCCATCTAGGTCTTTGGAGAGGTTCGAATTACAAAATGGTTATGCCGGAGATGCTGACTTTGCTGCTCCTAGACGATCCACGGGGAAAAAGTTTGATCGTACGGAGTATGGCCGGCAAAACCAGCGCGAACCCTCGAAGCATAAGGTTGAATCTGGTACTGGCAATAATCAAAGACAGGATGGTGACGTTGTTGCTGCAGAAAGAGTTAGGGAAAAGGCGAAATTGAATAACAGAGAGGGAAAGAAGGATGCTGGGCGTAATCATTTGAATGTATCGAGGAAGCCTTTTGAAGATGAGATGGTTGATGGATGGCCCAAATGGCTAGTTGATAACGTTCCAAAGGAAGCATTGGCTGGCTTGACTCCCAAGAGTGCTGAATCGTATAGAATGATTAATAAGGTAGGGCAGGGAACTTATAGCAATGTTTATAAAGCTCGAGATCGGAACACTGGGGAATTAGTGGCCCTCAAGAAGGTGCGCCTTGACACATCAAAGCCTGAATGCATTAAATTCATGGCAAGAGAAATTATGATATTACGGAGATTGGATCATCCCAATGTATTAAAACTCAAAGGATTGGCTACTTCAAGAATGCATTATAGTCTTTATCTCGTTTTTGACTTCATGCATTCCGACTTGGCTAGAATAACTTATCGTCCTAGGAGATTAACTGAACCACAGGTCAAGGCCTACATGCATCAATTGCTTTCAGGTCTGCAGCATTGCCATGAGAGGGGCATTTTGCATAGAGATATCAAAGGTTCAAACCTTTTGATTGATAAAAGTGGGATGCTTAAGATTGCAGATTTCGGGTTGGCCAATTATTATAATCCCAACCATAACCAGCCTCTCACAAGCAGGGTCGTGACACTATGGTACAGAGCTCCTGAGCTGCTGCTAGGTGCTACAGATTATGGAGTTGGAGTTGATTTATGGAGTGCTGGATGCCTTCTGGCAGAAATGTTTACAGGGGCTCCTATTATGCCTGGTAGAACAGAGGTGGAGCAACTTCATAGAATTTTTAGGCTATGTGGCACGCCATCAGAAGGTTATTGGAAAAAATTCAAAGCTACTGGGACTTTTAAGCCTCCGAAGTCTTATAGACCCTCCCTTGTAGAGACTTTCAAAGATTTCCCTCCATTTTCTTTGGGTCTATTATGTACTCTGCTTTCCTTGGATCCTGCTTATCGTGGAACTGCATCTAAAGCTCTCCAAAATCAATTTTTCTATACAAGTCCTTTGGCATGTGACCTCTCCGGTCTACCTGTGGTCTGCATTGAAGACGAGGAACAAGATCAAGCCGATGAACAAATCAAGCGCATGAATTCTAAACTCAGACGCTCCCGTACATTACTTGAGCATCGCAGAAAGAGTCTGGCATCTGAAAAGCCAGCAGAACCTACCATATCTTCTAAAGAGGAATTGAGAAAGAATGCTGATACATACGTCCCACATGAAGAACTGGGTAGCATAACAACAACAACCAGTAGTACCTTGTTAAGTTTGAATCCTCCTGATGCAAAGGATTTTTCTTCACCTATCTTCTCTCCAGATGTGTCCTCAGATCAAAAGCTGCTCCTGAAAACCGATTGTCATGATAATGGTGGTGGGAACATTCATAAACTTCCTCCTTTACCCGAGTTGAAATCACGTGCAGCCTGGGGAGAAGATACCATGCACGGATTTCGCCCCGTTCGCAGGTCTTCTTCCACCAGAGATTTCAGAATTTCAAGACAAAGGGATCGTTTACTCGTTCAAACAGATGATGAGACTGCCAAAGATGACATGTAA 1812 0.4365 MGSHQVKPSRSLERFELQNGYAGDADFAAPRRSTGKKFDRTEYGRQNQREPSKHKVESGTGNNQRQDGDVVAAERVREKAKLNNREGKKDAGRNHLNVSRKPFEDEMVDGWPKWLVDNVPKEALAGLTPKSAESYRMINKVGQGTYSNVYKARDRNTGELVALKKVRLDTSKPECIKFMAREIMILRRLDHPNVLKLKGLATSRMHYSLYLVFDFMHSDLARITYRPRRLTEPQVKAYMHQLLSGLQHCHERGILHRDIKGSNLLIDKSGMLKIADFGLANYYNPNHNQPLTSRVVTLWYRAPELLLGATDYGVGVDLWSAGCLLAEMFTGAPIMPGRTEVEQLHRIFRLCGTPSEGYWKKFKATGTFKPPKSYRPSLVETFKDFPPFSLGLLCTLLSLDPAYRGTASKALQNQFFYTSPLACDLSGLPVVCIEDEEQDQADEQIKRMNSKLRRSRTLLEHRRKSLASEKPAEPTISSKEELRKNADTYVPHEELGSITTTTSSTLLSLNPPDAKDFSSPIFSPDVSSDQKLLLKTDCHDNGGGNIHKLPPLPELKSRAAWGEDTMHGFRPVRRSSSTRDFRISRQRDRLLVQTDDETAKDDM 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g3014 603 FunFam Putative serine/threonine-protein kinase 218 454 - -
Alju01g3014 603 PANTHER CELL DIVISION PROTEIN KINASE 133 421 - -
Alju01g3014 603 MobiDBLite consensus disorder prediction 453 490 - -
Alju01g3014 603 ProSitePatterns Serine/Threonine protein kinases active-site signature. 254 266 IPR008271 GO:0004672|GO:0006468
Alju01g3014 603 MobiDBLite consensus disorder prediction 1 71 - -
Alju01g3014 603 MobiDBLite consensus disorder prediction 494 511 - -
Alju01g3014 603 Gene3D Phosphorylase Kinase; domain 1 124 217 - -
Alju01g3014 603 ProSitePatterns Protein kinases ATP-binding region signature. 141 164 IPR017441 GO:0005524
Alju01g3014 603 ProSiteProfiles Protein kinase domain profile. 135 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g3014 603 FunFam probable serine/threonine-protein kinase At1g54610 122 217 - -
Alju01g3014 603 Gene3D Transferase(Phosphotransferase) domain 1 220 457 - -
Alju01g3014 603 MobiDBLite consensus disorder prediction 30 56 - -
Alju01g3014 603 SUPERFAMILY Protein kinase-like (PK-like) 130 420 IPR011009 -
Alju01g3014 603 MobiDBLite consensus disorder prediction 453 511 - -
Alju01g3014 603 Pfam Protein kinase domain 135 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g3014 603 SMART serkin_6 135 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g3014 Alju-ChrAlju01 50501622 50506050 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g3014 130 463 Core Cell Cycle Gene Families AT5G10270 43.539 9.58e-94 295
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Alju01g3014 Pkinase 5.8e-67 CL0016