Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g3009 ATGATCCGTAAGAATGCCGTGGAAAGTATATTAGCAGAATGTGATATCTTAATTACAGTACGCAACCCTTTTATGGTTCGTTTCTTCTATTCATTTGCATGTAGTGAGAACTTGTATCTTGTCATGGAATATCTTAATGGAGGCGACCTCTATTCACTATTAAGGAATTTAGGCTGCCTGGATGAGGAAGTTGCTCGTGTATATATAGTTGAAGTGGTGCTTGCATTGGAATATTTGCATTCACTGAGGGTAGTTCATCGTGACTTGAAGCTAGACAATTTGTTGATTGCATATGATGGTCATAGTAAGTTGACGGATTTTGGCCTTTCAAAAGTAGGTCTAATCAACAGCACTGATGATTTATCTGGTCCAGTGGTGAGTGGGACATCCCTACTTGGTGAAGATGAACCTCAGTTATCTACATCTGAGCATCAAAGTGAAAGAAGGAAGAAATGTTCTGCTATGGGTATACCTGATTACTTAGCACTAGAGATACTCTTAAGAACTGGGCATGAATCTCTCCAAGCTTGCATCAATCAACTATGA 546 0.3919 MIRKNAVESILAECDILITVRNPFMVRFFYSFACSENLYLVMEYLNGGDLYSLLRNLGCLDEEVARVYIVEVVLALEYLHSLRVVHRDLKLDNLLIAYDGHSKLTDFGLSKVGLINSTDDLSGPVVSGTSLLGEDEPQLSTSEHQSERRKKCSAMGIPDYLALEILLRTGHESLQACINQL 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g3009 181 MobiDBLite consensus disorder prediction 129 151 - -
Alju01g3009 181 ProSiteProfiles Protein kinase domain profile. 1 181 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g3009 181 Gene3D Phosphorylase Kinase; domain 1 1 48 - -
Alju01g3009 181 SUPERFAMILY Protein kinase-like (PK-like) 3 170 IPR011009 -
Alju01g3009 181 Gene3D Transferase(Phosphotransferase) domain 1 49 172 - -
Alju01g3009 181 ProSitePatterns Serine/Threonine protein kinases active-site signature. 84 96 IPR008271 GO:0004672|GO:0006468
Alju01g3009 181 SMART serkin_6 1 181 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g3009 181 Pfam Protein kinase domain 5 112 IPR000719 GO:0004672|GO:0005524|GO:0006468
Alju01g3009 181 PANTHER SERINE/THREONINE-PROTEIN KINASE 1 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g3009 Alju-ChrAlju01 50361003 50362980 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g3009 1 171 AGC Kinase Gene Family AT3G17850 81.871 4.09e-91 287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_MAST Alju01g3009 Pkinase 2.6e-30 CL0016